Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 RN7SKP250-201ENST00000363924 321 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 MT-RNR1-201ENST00000389680 954 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 AC104297.1-201ENST00000393779 870 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 RPL23AP17-201ENST00000401064 499 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 snoU13.29-201ENST00000459370 104 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 RN7SL39P-201ENST00000462264 297 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 RPL23AP64-201ENST00000469465 435 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 AC090058.1-201ENST00000498788 435 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 PSMA2P2-201ENST00000504319 686 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 AC018645.1-201ENST00000505003 109 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 RNU6-319P-201ENST00000516025 108 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 AC116917.1-201ENST00000520558 305 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 AC084759.1-201ENST00000561168 290 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 MIR4675-201ENST00000577898 77 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 FAM60CP-201ENST00000591086 664 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 AC009303.3-201ENST00000591103 736 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 RPL31P11-201ENST00000426558 1558 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 AC025470.1-201ENST00000510053 2032 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 SAMM50P1-201ENST00000455403 1399 ntBASIC6.04□□□□□ -1.44
VMP1Q96GC9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.04□□□□□ -1.44
VMP1Q96GC9 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VMP1Q96GC9 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 GNG5P2-201ENST00000372054 207 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 DSTNP5-201ENST00000427921 523 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 GTF3AP6-201ENST00000432585 986 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC007383.1-201ENST00000445875 636 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC022415.1-202ENST00000486612 523 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 RN7SL568P-201ENST00000493069 298 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC022206.1-201ENST00000495947 347 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC117500.1-201ENST00000497352 755 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 RPS27AP18-201ENST00000515536 459 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 FAM106CP-201ENST00000582212 507 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC026898.1-201ENST00000586404 571 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 AL589765.6-201ENST00000601909 549 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC004241.3-201ENST00000611728 517 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 AC012676.3-201ENST00000614983 479 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 MRPL57P1-201ENST00000621486 265 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
VMP1Q96GC9 LINC02495-203ENST00000636704 242 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 STX3-208ENST00000641815 3236 ntBASIC6.03□□□□□ -1.44
VMP1Q96GC9 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VMP1Q96GC9 PPBPP2-201ENST00000513150 1362 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms