Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 CYCSP38-201ENST00000559840 322 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 MIR132-201ENST00000591554 101 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AC006924.1-201ENST00000610750 559 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AL512356.3-201ENST00000623005 461 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 DNM1P47-203ENST00000571780 12667 ntBASIC5.69□□□□□ -1.5
CCDC71Q8IV32 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC71Q8IV32 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 RNU11-201ENST00000387069 134 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 U3.23-201ENST00000391132 200 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC112492.2-201ENST00000432774 1030 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 RPS3AP38-201ENST00000435889 763 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 VPS25P1-201ENST00000455691 508 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC104109.1-201ENST00000498563 436 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 RN7SL104P-201ENST00000498686 293 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC095052.1-201ENST00000509955 863 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 OR6M2P-201ENST00000529831 871 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC036111.2-201ENST00000533247 901 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC060766.1-201ENST00000590824 627 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC020916.2-201ENST00000591242 360 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC025857.2-201ENST00000602711 238 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AL360012.1-201ENST00000602813 131 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC092681.3-201ENST00000609463 678 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AL096712.1-201ENST00000614561 159 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AC139426.3-201ENST00000605648 2059 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AL049634.1-201ENST00000453770 1720 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 AL731532.1-201ENST00000623972 4236 ntBASIC5.68□□□□□ -1.5
CCDC71Q8IV32 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71Q8IV32 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 SYT14P1-202ENST00000600441 1448 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 RN7SKP77-201ENST00000363261 353 ntBASIC5.67□□□□□ -1.5
CCDC71Q8IV32 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71Q8IV32 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms