Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL445183.3-201ENST00000414168 502 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 GAPDHP37-201ENST00000442317 968 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC016724.1-201ENST00000453215 421 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC004924.1-201ENST00000480160 781 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 RN7SL37P-201ENST00000490461 307 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC106822.1-201ENST00000502647 526 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC122718.2-201ENST00000505325 591 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 MTATP6P22-201ENST00000507369 598 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 CENPUP1-201ENST00000526649 1202 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 TPRKBP2-201ENST00000565969 475 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AL117336.2-201ENST00000602435 335 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC091805.2-201ENST00000603848 235 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AP002345.2-201ENST00000609961 904 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC090970.3-201ENST00000612566 866 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 uc_338.29-201ENST00000615099 168 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AL049541.2-201ENST00000626377 555 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC027559.1-201ENST00000636288 271 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC097634.1-201ENST00000604491 2467 ntBASIC8.96□□□□□ -0.98
RC3H1Q5TC82 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.96□□□□□ -0.98
RC3H1Q5TC82 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 U3.4-201ENST00000363352 213 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 RNU1-65P-201ENST00000363919 148 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 SNORA70G-201ENST00000383923 142 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 MIR1282-201ENST00000408865 101 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 RNU2-66P-201ENST00000410650 161 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 MTND4P19-201ENST00000446659 478 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 OR51P1P-201ENST00000447547 942 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC144530.1-201ENST00000452862 555 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC091874.2-201ENST00000505889 720 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC005178.1-201ENST00000508392 440 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC093816.1-201ENST00000515076 913 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 IGKV2D-38-201ENST00000518423 240 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 C1GALT1P3-201ENST00000522049 819 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AP003392.2-201ENST00000527269 208 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AP000916.1-201ENST00000533869 835 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC025918.2-201ENST00000558683 763 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.95□□□□□ -0.98
RC3H1Q5TC82 AL645933.2-201ENST00000606743 1207 ntBASIC8.95□□□□□ -0.98
RC3H1Q5TC82 MIR6778-201ENST00000617912 73 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms