Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CKS1BP61024 HSPE1P27-201ENST00000430808 296 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 AC138761.5-201ENST00000433967 325 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC4.24□□□□□ -1.73
CKS1BP61024 GAPDHP33-201ENST00000443168 1013 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC4.24□□□□□ -1.73
CKS1BP61024 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.24□□□□□ -1.73
CKS1BP61024 MTND6P5-201ENST00000448266 512 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC4.24□□□□□ -1.73
CKS1BP61024 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CKS1BP61024 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.24□□□□□ -1.73
CKS1BP61024 RN7SL37P-201ENST00000490461 307 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 RPL5P14-201ENST00000494197 878 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.24□□□□□ -1.73
CKS1BP61024 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.24□□□□□ -1.73
CKS1BP61024 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 AC114940.1-201ENST00000512162 1265 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.24□□□□□ -1.73
CKS1BP61024 CARSP2-201ENST00000520688 277 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 AC022882.1-201ENST00000532142 501 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC4.24□□□□□ -1.73
CKS1BP61024 DCN-215ENST00000550099 719 ntTSL 2 BASIC4.24□□□□□ -1.73
CKS1BP61024 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.24□□□□□ -1.73
CKS1BP61024 AC023968.1-201ENST00000560719 475 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.24□□□□□ -1.73
CKS1BP61024 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.24□□□□□ -1.73
CKS1BP61024 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC4.24□□□□□ -1.73
CKS1BP61024 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.24□□□□□ -1.73
CKS1BP61024 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC4.24□□□□□ -1.73
CKS1BP61024 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 AL021368.3-201ENST00000607119 578 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC4.24□□□□□ -1.73
CKS1BP61024 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 AL445649.1-201ENST00000615941 691 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 AC131238.1-201ENST00000617135 328 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC4.24□□□□□ -1.73
CKS1BP61024 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CKS1BP61024 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CKS1BP61024 AC093909.5-201ENST00000621839 1799 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CKS1BP61024 DDX18P3-201ENST00000404856 2007 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CKS1BP61024 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
CKS1BP61024 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CKS1BP61024 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.23□□□□□ -1.73
CKS1BP61024 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS1BP61024 PSMC1P6-201ENST00000477233 1319 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 AL034370.1-201ENST00000397254 1590 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CKS1BP61024 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CKS1BP61024 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS1BP61024 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CKS1BP61024 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS1BP61024 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CKS1BP61024 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS1BP61024 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CKS1BP61024 RNA5SP152-201ENST00000365184 110 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CKS1BP61024 AC226101.1-201ENST00000401483 387 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS1BP61024 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS1BP61024 RN7SKP151-201ENST00000410230 316 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 AL034379.1-201ENST00000423216 253 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 AL157884.1-201ENST00000424561 454 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 ETF1P1-206ENST00000427296 984 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 RPL3P11-201ENST00000434028 1146 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 OR52U1P-201ENST00000439752 923 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS1BP61024 AC239800.1-201ENST00000442049 719 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS1BP61024 MED28P3-201ENST00000444288 531 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 RARRES2P3-201ENST00000457739 473 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 RPS4XP17-201ENST00000479057 754 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 AF305872.1-201ENST00000485217 471 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 AC093878.1-201ENST00000515630 432 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 SCARNA5-201ENST00000516201 276 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 AF186190.1-201ENST00000517470 480 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS1BP61024 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS1BP61024 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC4.23□□□□□ -1.73
CKS1BP61024 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS1BP61024 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC4.23□□□□□ -1.73
CKS1BP61024 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 AC010287.1-201ENST00000566916 357 ntBASIC4.23□□□□□ -1.73
CKS1BP61024 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS1BP61024 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CKS1BP61024 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms