Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.15□□□□□ -1.26
NUP98P52948 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.15□□□□□ -1.26
NUP98P52948 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.15□□□□□ -1.26
NUP98P52948 AL445222.1-201ENST00000607259 628 ntBASIC7.15□□□□□ -1.26
NUP98P52948 AC000068.2-201ENST00000608816 460 ntBASIC7.15□□□□□ -1.26
NUP98P52948 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.15□□□□□ -1.26
NUP98P52948 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.15□□□□□ -1.26
NUP98P52948 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 SPATA31C1-201ENST00000420021 3895 ntBASIC7.15□□□□□ -1.26
NUP98P52948 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.15□□□□□ -1.26
NUP98P52948 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
NUP98P52948 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
NUP98P52948 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.26
NUP98P52948 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.15□□□□□ -1.26
NUP98P52948 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.26
NUP98P52948 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NUP98P52948 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.15□□□□□ -1.26
NUP98P52948 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NUP98P52948 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
NUP98P52948 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
NUP98P52948 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NUP98P52948 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NUP98P52948 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
NUP98P52948 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NUP98P52948 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.15□□□□□ -1.27
NUP98P52948 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
NUP98P52948 SNORA16A-201ENST00000384342 137 ntBASIC7.15□□□□□ -1.27
NUP98P52948 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.15□□□□□ -1.27
NUP98P52948 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.15□□□□□ -1.27
NUP98P52948 LDHBP2-201ENST00000456969 1005 ntBASIC7.15□□□□□ -1.27
NUP98P52948 AC005532.2-201ENST00000467154 373 ntBASIC7.15□□□□□ -1.27
NUP98P52948 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.15□□□□□ -1.27
NUP98P52948 AP006245.2-201ENST00000522004 300 ntBASIC7.15□□□□□ -1.27
NUP98P52948 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.15□□□□□ -1.27
NUP98P52948 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NUP98P52948 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.15□□□□□ -1.27
NUP98P52948 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.15□□□□□ -1.27
NUP98P52948 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NUP98P52948 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.27
NUP98P52948 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NUP98P52948 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.14□□□□□ -1.27
NUP98P52948 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
NUP98P52948 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NUP98P52948 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
NUP98P52948 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
NUP98P52948 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.14□□□□□ -1.27
NUP98P52948 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
NUP98P52948 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.14□□□□□ -1.27
NUP98P52948 AL450996.1-201ENST00000445574 1202 ntBASIC7.14□□□□□ -1.27
NUP98P52948 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.14□□□□□ -1.27
NUP98P52948 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.14□□□□□ -1.27
NUP98P52948 RN7SL184P-201ENST00000488308 297 ntBASIC7.14□□□□□ -1.27
NUP98P52948 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NUP98P52948 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.14□□□□□ -1.27
NUP98P52948 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.14□□□□□ -1.27
NUP98P52948 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.14□□□□□ -1.27
NUP98P52948 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NUP98P52948 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NUP98P52948 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.14□□□□□ -1.27
NUP98P52948 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.14□□□□□ -1.27
NUP98P52948 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.14□□□□□ -1.27
NUP98P52948 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.14□□□□□ -1.27
NUP98P52948 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.14□□□□□ -1.27
NUP98P52948 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
NUP98P52948 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
NUP98P52948 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.14□□□□□ -1.27
NUP98P52948 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.14□□□□□ -1.27
NUP98P52948 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NUP98P52948 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.14□□□□□ -1.27
NUP98P52948 AL662795.2-201ENST00000624252 3706 ntBASIC7.13□□□□□ -1.27
NUP98P52948 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NUP98P52948 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NUP98P52948 GAPDHP24-201ENST00000328713 983 ntBASIC7.13□□□□□ -1.27
NUP98P52948 AC005042.1-201ENST00000393397 800 ntBASIC7.13□□□□□ -1.27
NUP98P52948 RN7SKP273-201ENST00000411392 314 ntBASIC7.13□□□□□ -1.27
NUP98P52948 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.13□□□□□ -1.27
NUP98P52948 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.13□□□□□ -1.27
NUP98P52948 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.13□□□□□ -1.27
NUP98P52948 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.13□□□□□ -1.27
NUP98P52948 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.13□□□□□ -1.27
NUP98P52948 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.13□□□□□ -1.27
NUP98P52948 BNIP3P32-201ENST00000600015 554 ntBASIC7.13□□□□□ -1.27
NUP98P52948 AC132068.1-201ENST00000623805 459 ntBASIC7.13□□□□□ -1.27
NUP98P52948 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.13□□□□□ -1.27
NUP98P52948 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NUP98P52948 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
NUP98P52948 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NUP98P52948 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
NUP98P52948 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms