Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NPM1P45-201ENST00000583151 559 ntBASIC6.53□□□□□ -1.36
HOXC8P31273 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC8P31273 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC8P31273 AC107993.1-201ENST00000591343 684 ntBASIC6.53□□□□□ -1.36
HOXC8P31273 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC8P31273 FO393422.1-201ENST00000603908 708 ntBASIC6.53□□□□□ -1.36
HOXC8P31273 AC091193.1-201ENST00000604640 448 ntBASIC6.53□□□□□ -1.36
HOXC8P31273 AL139099.4-201ENST00000614802 114 ntBASIC6.53□□□□□ -1.36
HOXC8P31273 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.53□□□□□ -1.36
HOXC8P31273 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC8P31273 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC8P31273 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
HOXC8P31273 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC8P31273 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC8P31273 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC8P31273 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC8P31273 AC119674.1-213ENST00000641177 1386 ntBASIC6.53□□□□□ -1.36
HOXC8P31273 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC8P31273 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC8P31273 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HOXC8P31273 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
HOXC8P31273 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.52□□□□□ -1.36
HOXC8P31273 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.52□□□□□ -1.36
HOXC8P31273 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
HOXC8P31273 AP003175.1-201ENST00000641383 6658 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 AL078595.2-201ENST00000605309 1780 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HOXC8P31273 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HOXC8P31273 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC8P31273 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HOXC8P31273 AP000641.1-201ENST00000531988 1639 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC8P31273 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HOXC8P31273 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
HOXC8P31273 MIR1178-201ENST00000408396 91 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 MYL6P5-201ENST00000412707 459 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.52□□□□□ -1.37
HOXC8P31273 BRWD1P3-201ENST00000428816 390 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 FABP5P2-201ENST00000439042 408 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 RAB28P2-201ENST00000454299 641 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.52□□□□□ -1.37
HOXC8P31273 AL022319.1-201ENST00000458183 1167 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 AL157777.1-201ENST00000468100 304 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 RPL5P16-201ENST00000471467 790 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC8P31273 AC008638.1-201ENST00000506035 866 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC8P31273 TPM3P3-201ENST00000521343 354 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC8P31273 OR4A42P-201ENST00000531397 938 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC8P31273 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC8P31273 AC137695.1-201ENST00000604126 489 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 AC063952.1-203ENST00000634410 658 ntBASIC6.52□□□□□ -1.37
HOXC8P31273 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC8P31273 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC8P31273 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
HOXC8P31273 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC8P31273 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC8P31273 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC8P31273 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HOXC8P31273 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HOXC8P31273 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HOXC8P31273 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC8P31273 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC8P31273 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC8P31273 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC8P31273 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC8P31273 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HOXC8P31273 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HOXC8P31273 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC8P31273 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HOXC8P31273 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXC8P31273 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.51□□□□□ -1.37
HOXC8P31273 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXC8P31273 AC013268.2-201ENST00000420753 337 ntBASIC6.51□□□□□ -1.37
HOXC8P31273 AC007562.1-201ENST00000421819 517 ntBASIC6.51□□□□□ -1.37
HOXC8P31273 AL022331.1-201ENST00000429025 477 ntBASIC6.51□□□□□ -1.37
HOXC8P31273 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.51□□□□□ -1.37
HOXC8P31273 OR6C71P-201ENST00000432580 913 ntBASIC6.51□□□□□ -1.37
HOXC8P31273 Z84478.1-201ENST00000438230 1219 ntBASIC6.51□□□□□ -1.37
HOXC8P31273 AC023274.2-201ENST00000445264 521 ntBASIC6.51□□□□□ -1.37
HOXC8P31273 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXC8P31273 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXC8P31273 CCDC11P1-201ENST00000503137 1162 ntBASIC6.51□□□□□ -1.37
HOXC8P31273 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC8P31273 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXC8P31273 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC8P31273 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms