Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HOXA2O43364 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXA2O43364 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC8.44□□□□□ -1.06
HOXA2O43364 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 NSRP1P1-201ENST00000444067 1693 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
HOXA2O43364 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC8.43□□□□□ -1.06
HOXA2O43364 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.43□□□□□ -1.06
HOXA2O43364 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC8.43□□□□□ -1.06
HOXA2O43364 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 OR7E101P-201ENST00000400428 513 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 CALM2P3-201ENST00000400429 449 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.43□□□□□ -1.06
HOXA2O43364 OR2W4P-201ENST00000406496 926 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC8.43□□□□□ -1.06
HOXA2O43364 SNX18P13-201ENST00000412442 529 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 AC007390.1-201ENST00000415722 356 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC8.43□□□□□ -1.06
HOXA2O43364 AC013429.2-201ENST00000418798 781 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 AC069157.1-201ENST00000421749 137 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC8.43□□□□□ -1.06
HOXA2O43364 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC8.43□□□□□ -1.06
HOXA2O43364 HSPD1P12-201ENST00000429127 1069 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 AC002069.1-201ENST00000429649 1159 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC8.43□□□□□ -1.06
HOXA2O43364 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC8.43□□□□□ -1.06
HOXA2O43364 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.43□□□□□ -1.06
HOXA2O43364 snoU109.1-201ENST00000459339 135 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 RN7SL36P-201ENST00000469345 276 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 RPL5P15-201ENST00000475870 897 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 RN7SL635P-201ENST00000492123 296 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 AC021678.1-201ENST00000505195 936 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC8.43□□□□□ -1.06
HOXA2O43364 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
HOXA2O43364 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.43□□□□□ -1.06
HOXA2O43364 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 EIF4EBP2P2-201ENST00000563883 333 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC8.43□□□□□ -1.06
HOXA2O43364 AC020914.6-201ENST00000594327 272 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 FXYD6P1-201ENST00000604857 285 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 AC107214.2-201ENST00000608204 634 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 AL359535.1-201ENST00000612100 1087 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 7SK.12-201ENST00000612820 244 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 STMN1P1-201ENST00000617809 440 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 AC002550.2-201ENST00000621246 394 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
HOXA2O43364 AL391380.1-201ENST00000439300 1432 ntBASIC8.43□□□□□ -1.06
HOXA2O43364 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
HOXA2O43364 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
HOXA2O43364 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC8.43□□□□□ -1.06
HOXA2O43364 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.43□□□□□ -1.06
HOXA2O43364 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
HOXA2O43364 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
HOXA2O43364 AC117529.2-201ENST00000512159 2068 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 AC011453.1-201ENST00000597619 2239 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
HOXA2O43364 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
HOXA2O43364 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 OR4K15-201ENST00000305051 1216 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXA2O43364 Y_RNA.326-201ENST00000365176 113 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 RNU6-877P-201ENST00000383868 107 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 RNU4-31P-201ENST00000384211 141 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 RN7SKP117-201ENST00000410175 264 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 YWHAZP3-201ENST00000415292 738 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC8.42□□□□□ -1.06
HOXA2O43364 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC8.42□□□□□ -1.06
HOXA2O43364 AC006065.1-201ENST00000422539 802 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 AL831737.1-201ENST00000441288 271 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 AL591379.2-201ENST00000450223 397 ntBASIC8.42□□□□□ -1.06
HOXA2O43364 CEACAMP3-202ENST00000483806 638 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms