Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TBC1D3FA6NER0 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.22□□□□□ -1.41
TBC1D3FA6NER0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.22□□□□□ -1.41
TBC1D3FA6NER0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.21□□□□□ -1.41
TBC1D3FA6NER0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TBC1D3FA6NER0 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.41
TBC1D3FA6NER0 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TBC1D3FA6NER0 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AL157831.2-201ENST00000564681 3095 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 GUCY1B2-204ENST00000531898 1979 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 CCNB2P1-201ENST00000399411 1150 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AL132875.1-201ENST00000403623 949 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AL353626.3-201ENST00000413399 657 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 RPS7P8-201ENST00000418311 581 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 RAB9AP5-201ENST00000437794 597 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 RAB9AP2-201ENST00000443911 597 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 VN1R48P-201ENST00000448149 1036 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC006499.4-201ENST00000510947 694 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 CR383658.1-201ENST00000514609 734 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 RNA5SP340-201ENST00000517132 107 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AP001858.2-201ENST00000536213 601 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC007956.1-201ENST00000555623 542 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC245014.3-201ENST00000618589 347 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC026124.2-201ENST00000621847 656 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 SNX18P12-201ENST00000624821 759 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC106858.1-201ENST00000637497 429 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AC008691.1-209ENST00000642094 814 ntBASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TBC1D3FA6NER0 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AP001002.1-201ENST00000625148 1513 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 CDY5P-201ENST00000411487 1580 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 CDY9P-201ENST00000451397 1580 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 RNU6-697P-201ENST00000363348 107 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 SUGT1P2-201ENST00000379452 992 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 RNU6-1176P-201ENST00000390955 107 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 RPS3P2-201ENST00000421346 701 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 RPS29P14-201ENST00000431518 171 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 ACA64.1-201ENST00000459171 127 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 OR5H7P-201ENST00000514084 930 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 RNA5SP116-201ENST00000516132 98 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 SEC11B-201ENST00000518383 499 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC092865.1-201ENST00000544395 1023 ntBASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.2□□□□□ -1.42
TBC1D3FA6NER0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms