Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC105275.2-201ENST00000567907 711 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC139493.1-201ENST00000604368 397 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AF146191.1-201ENST00000604941 889 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AL513218.1-201ENST00000606527 391 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC022140.2-201ENST00000623500 188 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC022743.1-201ENST00000624990 664 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 SEPT14P19-203ENST00000633205 211 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 OR11H2-202ENST00000641517 1085 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 CR848007.1-201ENST00000442354 1699 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHISA3A0PJX4 CYP2G2P-201ENST00000594920 1485 ntBASIC6.41□□□□□ -1.38
SHISA3A0PJX4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 DDX18P6-201ENST00000450119 1997 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC110597.1-201ENST00000562669 3176 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 FO393411.1-201ENST00000325612 420 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 OR1L1-202ENST00000373686 1083 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 PHBP1-201ENST00000392260 808 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 RNA5SP80-201ENST00000410475 111 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 FNDC3CP-201ENST00000420795 1155 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 RPL4P4-201ENST00000422486 1284 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 OR6K4P-201ENST00000423179 955 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 FAM96AP1-201ENST00000430879 482 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC008072.1-201ENST00000434254 824 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC091862.1-201ENST00000438016 1100 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 USP9YP22-201ENST00000438971 294 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 VN1R34P-201ENST00000447387 883 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC079776.3-201ENST00000450665 370 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 RN7SL88P-201ENST00000480166 299 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 CEACAMP3-202ENST00000483806 638 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC114786.3-201ENST00000509304 705 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 HSPE1P23-201ENST00000509838 286 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC118273.2-201ENST00000532092 465 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 NPIPP1-203ENST00000547107 1071 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC091304.4-201ENST00000565703 620 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms