Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 HSPD1P7-201ENST00000447985 1686 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 METTL5-202ENST00000308099 629 ntTSL 3 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC007068.1-201ENST00000396690 844 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AL391422.1-201ENST00000402155 436 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AL031577.2-201ENST00000404133 280 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 RNA5SP280-201ENST00000411230 115 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC012519.1-201ENST00000424588 610 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 CHCHD3P1-201ENST00000425516 676 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 RAC1P8-201ENST00000427086 527 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 ETF1P3-201ENST00000430422 1160 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 AL359385.1-201ENST00000456509 365 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 OR13C1P-201ENST00000457612 963 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 RPSAP39-201ENST00000467439 883 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 RN7SL160P-201ENST00000468558 284 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 RPL23AP8-201ENST00000479812 475 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC068724.1-201ENST00000487100 792 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AP005202.1-201ENST00000489915 867 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC021146.7-201ENST00000509604 775 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 OR10J9P-201ENST00000511932 987 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC114940.1-201ENST00000512162 1265 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 SEPT10P1-201ENST00000517342 1162 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 CARSP2-201ENST00000520688 277 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 SSU72P6-201ENST00000532644 488 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 AL135978.1-201ENST00000553618 1266 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC087481.2-201ENST00000565492 330 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 MIR3611-201ENST00000584484 83 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 CLPTM1LP1-201ENST00000604519 484 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 OR2BH1P-201ENST00000608850 864 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC015922.4-201ENST00000612568 690 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC009878.1-201ENST00000621819 340 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AL359757.1-201ENST00000623176 255 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC124312.6-202ENST00000623624 418 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC008626.2-201ENST00000624425 248 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 MIR665-201ENST00000635949 72 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AL034408.1-201ENST00000637712 664 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 AL512310.3-201ENST00000547023 1335 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 ICE2P1-201ENST00000512800 1849 ntBASIC7.68□□□□□ -1.18
CNTN3Q9P232 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.68□□□□□ -1.18
CNTN3Q9P232 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CNTN3Q9P232 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CNTN3Q9P232 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CNTN3Q9P232 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CNTN3Q9P232 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.67□□□□□ -1.18
CNTN3Q9P232 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CNTN3Q9P232 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.67□□□□□ -1.18
CNTN3Q9P232 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CNTN3Q9P232 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CNTN3Q9P232 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.67□□□□□ -1.18
CNTN3Q9P232 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms