Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 AC090771.1-201ENST00000585803 1618 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 AL391261.1-201ENST00000555712 1479 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 AC061975.5-201ENST00000584928 1441 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
VRK1Q99986 RNA5SP514-201ENST00000363717 111 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 FAM204BP-201ENST00000369171 701 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 RN7SKP62-201ENST00000384539 329 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 MIR541-201ENST00000401360 84 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 AL121977.1-201ENST00000401636 979 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
VRK1Q99986 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 MTCO2P21-201ENST00000419780 677 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 AC092648.1-201ENST00000425870 423 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK1Q99986 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.03□□□□□ -1.44
VRK1Q99986 AC093166.2-201ENST00000455969 1017 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 MED28P7-201ENST00000456611 530 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 RPL6P9-201ENST00000466502 859 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK1Q99986 RPS14P8-201ENST00000478778 369 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 RN7SL88P-201ENST00000480166 299 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK1Q99986 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK1Q99986 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 SNORA31.13-201ENST00000516624 135 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK1Q99986 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK1Q99986 OR5D2P-201ENST00000524390 911 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK1Q99986 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
VRK1Q99986 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.03□□□□□ -1.44
VRK1Q99986 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK1Q99986 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK1Q99986 AC015818.6-201ENST00000584274 634 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 AC079610.2-201ENST00000604818 690 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 AL355493.4-201ENST00000618530 292 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 AC006386.1-201ENST00000619436 415 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
VRK1Q99986 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
VRK1Q99986 AC006213.6-201ENST00000623722 4179 ntBASIC6.03□□□□□ -1.44
VRK1Q99986 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK1Q99986 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
VRK1Q99986 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
VRK1Q99986 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
VRK1Q99986 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
VRK1Q99986 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
VRK1Q99986 AL355578.1-201ENST00000607405 1328 ntBASIC6.02□□□□□ -1.45
VRK1Q99986 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VRK1Q99986 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VRK1Q99986 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK1Q99986 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VRK1Q99986 ZNF849P-201ENST00000594711 1566 ntBASIC6.02□□□□□ -1.45
VRK1Q99986 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VRK1Q99986 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
VRK1Q99986 AC007159.1-201ENST00000566529 4706 ntBASIC6.02□□□□□ -1.45
VRK1Q99986 RPL12P13-201ENST00000310055 497 ntBASIC6.02□□□□□ -1.45
VRK1Q99986 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VRK1Q99986 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VRK1Q99986 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VRK1Q99986 RN7SKP184-201ENST00000362348 333 ntBASIC6.02□□□□□ -1.45
VRK1Q99986 RNU6-1017P-201ENST00000363613 106 ntBASIC6.02□□□□□ -1.45
VRK1Q99986 RNU6-236P-201ENST00000363886 106 ntBASIC6.02□□□□□ -1.45
VRK1Q99986 RNU6-906P-201ENST00000384700 70 ntBASIC6.02□□□□□ -1.45
VRK1Q99986 RN7SKP254-201ENST00000410685 310 ntBASIC6.02□□□□□ -1.45
VRK1Q99986 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.02□□□□□ -1.45
VRK1Q99986 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK1Q99986 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK1Q99986 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK1Q99986 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.02□□□□□ -1.45
VRK1Q99986 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VRK1Q99986 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.02□□□□□ -1.45
VRK1Q99986 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.02□□□□□ -1.45
VRK1Q99986 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK1Q99986 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
VRK1Q99986 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms