Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIR192-201ENST00000384915 110 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 RPS4XP5-201ENST00000419038 768 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 STRADBP1-201ENST00000478954 1281 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 MIR4646-201ENST00000580775 63 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 ZNF101P1-201ENST00000435701 1720 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC073365.1-203ENST00000641055 1992 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 UGT2B27P-201ENST00000505092 1620 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 HIST1H3PS1-201ENST00000404612 417 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AL161722.1-201ENST00000446972 1032 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 LDHBP2-201ENST00000456969 1005 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 RPL38P3-201ENST00000484463 213 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC022726.2-201ENST00000634673 547 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AL596275.2-208ENST00000641192 594 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC105749.1-201ENST00000631338 2008 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 GTF2IP4-201ENST00000453092 2054 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC126755.2-208ENST00000327792 462 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC138969.1-213ENST00000331436 462 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 RNA5SP335-201ENST00000363817 110 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 CYCSP6-201ENST00000434498 302 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AL022237.1-201ENST00000446663 358 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC006463.2-201ENST00000473326 348 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 SCARNA6.1-201ENST00000516989 238 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 SUMO2P19-201ENST00000518920 295 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 DPPA3P2-201ENST00000553589 478 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AL132640.3-201ENST00000630473 177 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 RPL23AP60-201ENST00000450011 454 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 RN7SL738P-201ENST00000470264 297 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC073581.1-201ENST00000519036 575 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 AC012616.1-201ENST00000600294 197 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 LINC01739-205ENST00000641890 573 ntBASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ALMS1Q8TCU4 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 MORF4L1P5-201ENST00000433352 961 ntBASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 AC096741.1-201ENST00000472250 846 ntBASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 AC008629.2-201ENST00000503783 483 ntBASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 AC010343.2-201ENST00000510162 224 ntBASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 AC063949.1-201ENST00000552900 865 ntBASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 AC018558.5-201ENST00000565840 952 ntBASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 AC012254.5-201ENST00000623573 478 ntBASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 AC002090.1-201ENST00000625000 2138 ntBASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms