Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC093392.1-201ENST00000366280 340 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 RNU6-1148P-201ENST00000410992 104 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 EEF1A1P34-201ENST00000419888 1267 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC005517.2-201ENST00000424673 553 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 DYNLL1P7-201ENST00000429273 258 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 ARL5AP4-201ENST00000430731 512 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 ASS1P5-201ENST00000435496 1239 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 AL139156.3-201ENST00000454802 394 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 YAP1P2-201ENST00000455104 610 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 RPL7P15-201ENST00000461190 712 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC063955.1-201ENST00000462872 685 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC044836.1-201ENST00000519514 274 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 RNF185-AS1-201ENST00000526089 353 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 AL845331.3-202ENST00000562856 261 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC110743.1-201ENST00000584870 478 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC087393.3-201ENST00000584971 166 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC131159.2-201ENST00000613236 702 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC093913.1-201ENST00000614178 329 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC010332.1-201ENST00000620439 97 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC129778.1-202ENST00000623812 261 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AL109806.1-201ENST00000623967 1248 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 AL591379.1-207ENST00000635982 261 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.9□□□□□ -0.98
VARS2Q5ST30 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
VARS2Q5ST30 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC8.9□□□□□ -0.98
VARS2Q5ST30 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.99
VARS2Q5ST30 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
VARS2Q5ST30 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
VARS2Q5ST30 AC073055.1-201ENST00000456901 1621 ntBASIC8.9□□□□□ -0.99
VARS2Q5ST30 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.99
VARS2Q5ST30 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
VARS2Q5ST30 CCDC174-202ENST00000383794 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
VARS2Q5ST30 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
VARS2Q5ST30 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
VARS2Q5ST30 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 TMPRSS11B-201ENST00000332644 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AL137145.2-201ENST00000399868 3086 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC073324.1-201ENST00000425993 1435 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AL445933.1-201ENST00000434240 2242 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 CUBNP1-201ENST00000412710 1790 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 MTND5P7-201ENST00000413558 1798 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC106800.1-201ENST00000501221 1362 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC117409.1-201ENST00000470499 1310 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AL354732.1-201ENST00000416416 2080 ntTSL 5 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AL354890.1-201ENST00000413730 346 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 TPMTP2-201ENST00000414372 726 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 ATP6V1G1P7-201ENST00000415853 349 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 PTP4A1P1-201ENST00000420539 515 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 RANP5-201ENST00000427731 655 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC002069.1-201ENST00000429649 1159 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 HMGN2P24-201ENST00000433516 273 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 MTND6P13-201ENST00000443510 523 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AL109809.3-201ENST00000456875 246 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AL449212.1-201ENST00000499853 517 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AF186996.2-201ENST00000508347 907 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 RNU6-835P-201ENST00000516974 104 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 SNORA25.17-201ENST00000517184 124 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 KCTD9P4-201ENST00000526766 1166 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AP000827.1-201ENST00000527814 258 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 OR6M2P-201ENST00000529831 871 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC069240.2-201ENST00000550242 609 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 260 ms