Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
COL16A1Q07092 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC7.73□□□□□ -1.17
COL16A1Q07092 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
COL16A1Q07092 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.73□□□□□ -1.17
COL16A1Q07092 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
COL16A1Q07092 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 RNU1-43P-201ENST00000365052 165 ntBASIC7.73□□□□□ -1.17
COL16A1Q07092 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 RPS16P5-201ENST00000406501 404 ntBASIC7.73□□□□□ -1.17
COL16A1Q07092 RPS6P23-201ENST00000413224 722 ntBASIC7.73□□□□□ -1.17
COL16A1Q07092 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.73□□□□□ -1.17
COL16A1Q07092 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC7.73□□□□□ -1.17
COL16A1Q07092 TEX41-205ENST00000431734 529 ntTSL 4 BASIC7.73□□□□□ -1.17
COL16A1Q07092 AC023141.8-201ENST00000442554 208 ntBASIC7.73□□□□□ -1.17
COL16A1Q07092 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC7.73□□□□□ -1.17
COL16A1Q07092 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
COL16A1Q07092 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.73□□□□□ -1.17
COL16A1Q07092 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.73□□□□□ -1.17
COL16A1Q07092 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL16A1Q07092 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 IMMTP1-201ENST00000435590 2219 ntBASIC7.72□□□□□ -1.17
COL16A1Q07092 AL136981.1-203ENST00000451452 3844 ntBASIC7.72□□□□□ -1.17
COL16A1Q07092 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.72□□□□□ -1.17
COL16A1Q07092 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 SNORA51.8-201ENST00000384234 132 ntBASIC7.72□□□□□ -1.17
COL16A1Q07092 SNORA67-201ENST00000384423 137 ntBASIC7.72□□□□□ -1.17
COL16A1Q07092 MIR130A-201ENST00000385274 89 ntBASIC7.72□□□□□ -1.17
COL16A1Q07092 USP9YP9-201ENST00000429406 715 ntBASIC7.72□□□□□ -1.17
COL16A1Q07092 AC092106.1-201ENST00000444291 373 ntBASIC7.72□□□□□ -1.17
COL16A1Q07092 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC7.72□□□□□ -1.17
COL16A1Q07092 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.72□□□□□ -1.17
COL16A1Q07092 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.72□□□□□ -1.17
COL16A1Q07092 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.72□□□□□ -1.17
COL16A1Q07092 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC7.72□□□□□ -1.17
COL16A1Q07092 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.72□□□□□ -1.17
COL16A1Q07092 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.72□□□□□ -1.17
COL16A1Q07092 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
COL16A1Q07092 ARHGAP42P2-201ENST00000416089 2140 ntBASIC7.72□□□□□ -1.17
COL16A1Q07092 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.72□□□□□ -1.17
COL16A1Q07092 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
COL16A1Q07092 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
COL16A1Q07092 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL16A1Q07092 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.72□□□□□ -1.17
COL16A1Q07092 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.71□□□□□ -1.17
COL16A1Q07092 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.71□□□□□ -1.17
COL16A1Q07092 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL16A1Q07092 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
COL16A1Q07092 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
COL16A1Q07092 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.71□□□□□ -1.17
COL16A1Q07092 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
COL16A1Q07092 MTCYBP21-201ENST00000443300 1113 ntBASIC7.71□□□□□ -1.17
COL16A1Q07092 TRY2P-201ENST00000448860 689 ntBASIC7.71□□□□□ -1.17
COL16A1Q07092 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.71□□□□□ -1.17
COL16A1Q07092 RPL37AP8-201ENST00000494116 276 ntBASIC7.71□□□□□ -1.17
COL16A1Q07092 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC7.71□□□□□ -1.17
COL16A1Q07092 MAL2-208ENST00000523307 556 ntTSL 4 BASIC7.71□□□□□ -1.17
COL16A1Q07092 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.71□□□□□ -1.17
COL16A1Q07092 AC078878.1-201ENST00000539832 958 ntBASIC7.71□□□□□ -1.17
COL16A1Q07092 AC127381.1-201ENST00000555979 939 ntBASIC7.71□□□□□ -1.17
COL16A1Q07092 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.71□□□□□ -1.17
COL16A1Q07092 OR4H6P-201ENST00000563771 921 ntBASIC7.71□□□□□ -1.17
COL16A1Q07092 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.71□□□□□ -1.17
COL16A1Q07092 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.71□□□□□ -1.17
COL16A1Q07092 AC025574.2-201ENST00000615621 514 ntBASIC7.71□□□□□ -1.17
COL16A1Q07092 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC7.71□□□□□ -1.17
COL16A1Q07092 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.71□□□□□ -1.17
COL16A1Q07092 CYP4F35P-202ENST00000636121 390 ntBASIC7.71□□□□□ -1.17
COL16A1Q07092 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
COL16A1Q07092 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
COL16A1Q07092 MROH3P-201ENST00000435735 2676 ntBASIC7.71□□□□□ -1.17
COL16A1Q07092 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL16A1Q07092 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL16A1Q07092 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.71□□□□□ -1.18
COL16A1Q07092 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL16A1Q07092 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL16A1Q07092 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL16A1Q07092 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
COL16A1Q07092 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.71□□□□□ -1.18
COL16A1Q07092 AC013488.1-201ENST00000526618 1838 ntBASIC7.71□□□□□ -1.18
COL16A1Q07092 AL157831.2-201ENST00000564681 3095 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms