Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 AC027575.3-201ENST00000583058 2747 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 AC020658.2-201ENST00000559030 4020 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 LINC01616-201ENST00000561816 2280 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 SALL4P7-201ENST00000555779 3120 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
LMNB1P20700 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 RPL5P5-201ENST00000392009 893 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 ATP5F1P2-201ENST00000398143 760 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 AL157702.1-201ENST00000398764 426 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 KRR1P1-201ENST00000419430 803 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 PTP4A1P7-201ENST00000423476 514 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
LMNB1P20700 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 MTND4P32-201ENST00000437189 1237 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.04□□□□□ -1.12
LMNB1P20700 EMC3-AS1-205ENST00000438698 534 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 CDY12P-201ENST00000440679 1015 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 CDY13P-201ENST00000445813 1015 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 KRTAP2-5P-201ENST00000446109 396 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 OR6K5P-201ENST00000447050 945 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 Z73417.1-201ENST00000447373 778 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 OR2A1-AS1-202ENST00000467944 422 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 RPL19P11-201ENST00000495944 589 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 AC008427.1-201ENST00000503102 655 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 AC112518.2-201ENST00000508565 425 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC8.04□□□□□ -1.12
LMNB1P20700 OR51A1P-201ENST00000511110 946 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC8.04□□□□□ -1.12
LMNB1P20700 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC8.04□□□□□ -1.12
LMNB1P20700 EEF1B2P2-201ENST00000519625 676 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 AC008429.4-201ENST00000521201 182 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 OR4V1P-201ENST00000525394 1140 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 AC027544.3-201ENST00000535082 757 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 MTCYBP23-201ENST00000558717 1102 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 AC084373.1-201ENST00000603311 235 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 HMGB1P51-201ENST00000605166 638 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 OR51C1P-201ENST00000608504 942 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
LMNB1P20700 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.04□□□□□ -1.12
LMNB1P20700 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 METTL8-218ENST00000638989 876 ntTSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 METTL8-219ENST00000640734 726 ntTSL 2 BASIC8.04□□□□□ -1.12
LMNB1P20700 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.04□□□□□ -1.12
LMNB1P20700 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.04□□□□□ -1.12
LMNB1P20700 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.04□□□□□ -1.12
LMNB1P20700 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
LMNB1P20700 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC8.04□□□□□ -1.12
LMNB1P20700 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.04□□□□□ -1.12
LMNB1P20700 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LMNB1P20700 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMNB1P20700 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMNB1P20700 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.03□□□□□ -1.12
LMNB1P20700 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.03□□□□□ -1.12
LMNB1P20700 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.03□□□□□ -1.12
LMNB1P20700 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LMNB1P20700 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LMNB1P20700 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LMNB1P20700 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.03□□□□□ -1.12
LMNB1P20700 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMNB1P20700 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMNB1P20700 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.03□□□□□ -1.12
LMNB1P20700 AL022393.1-201ENST00000625142 1677 ntBASIC8.03□□□□□ -1.12
LMNB1P20700 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMNB1P20700 AL354854.1-201ENST00000455940 1363 ntBASIC8.03□□□□□ -1.12
LMNB1P20700 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC8.03□□□□□ -1.12
LMNB1P20700 CASC19-255ENST00000641733 1385 ntBASIC8.03□□□□□ -1.12
LMNB1P20700 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMNB1P20700 RNA5SP242-201ENST00000364171 118 ntBASIC8.03□□□□□ -1.12
LMNB1P20700 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LMNB1P20700 LRRC37BP1-201ENST00000398851 714 ntBASIC8.03□□□□□ -1.12
LMNB1P20700 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LMNB1P20700 AL355615.1-201ENST00000406187 641 ntBASIC8.03□□□□□ -1.12
LMNB1P20700 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.03□□□□□ -1.12
LMNB1P20700 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms