Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 RPS27P20-201ENST00000492051 246 ntBASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 MRPS5P3-201ENST00000515577 166 ntBASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 NPM1P52-201ENST00000518264 846 ntBASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 OR56A7P-201ENST00000524865 941 ntBASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 NPIPB14P-203ENST00000532298 987 ntBASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 RN7SL230P-201ENST00000580835 303 ntBASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 MIR5010-201ENST00000582846 120 ntBASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 NF1P10-201ENST00000613227 742 ntBASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 AL357562.1-201ENST00000624911 609 ntBASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDLIM5Q96HC4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 CDC27P2-201ENST00000425026 1922 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC022164.1-201ENST00000568767 2673 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 RNA5SP110-201ENST00000362638 115 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 RNU6-1331P-201ENST00000363658 106 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 RPS7P8-201ENST00000418311 581 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 FAM183DP-201ENST00000421987 399 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC092865.3-201ENST00000425390 1026 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC010240.2-201ENST00000445363 1205 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 MTND4LP12-201ENST00000448237 295 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 SDC4P-201ENST00000453285 601 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 RN7SL612P-201ENST00000497704 295 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 CR383658.1-201ENST00000514609 734 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC116917.1-201ENST00000520558 305 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC025857.1-201ENST00000525252 377 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 ARGFXP2-201ENST00000579304 949 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC060766.1-201ENST00000590824 627 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC006115.2-201ENST00000596823 202 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC005479.3-201ENST00000602790 431 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 SMIM12P1-201ENST00000603004 274 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AL645933.2-201ENST00000606743 1207 ntBASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.93□□□□□ -1.46
PDLIM5Q96HC4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms