Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AL022394.1-201ENST00000606979 292 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 AC007620.3-201ENST00000608131 497 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 AL133370.2-201ENST00000619934 439 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SCN1BQ07699 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SCN1BQ07699 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.53□□□□□ -1.52
SCN1BQ07699 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.53□□□□□ -1.52
SCN1BQ07699 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SCN1BQ07699 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SCN1BQ07699 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.53□□□□□ -1.52
SCN1BQ07699 AC004076.2-201ENST00000620532 3323 ntBASIC5.53□□□□□ -1.52
SCN1BQ07699 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC068870.3-201ENST00000625077 2536 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.52□□□□□ -1.53
SCN1BQ07699 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SCN1BQ07699 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN1BQ07699 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SCN1BQ07699 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.52□□□□□ -1.53
SCN1BQ07699 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SCN1BQ07699 RNU11-6P-201ENST00000391127 133 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 AL139100.1-201ENST00000408001 498 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 RNU2-18P-201ENST00000411224 162 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AL672212.1-201ENST00000422246 400 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 MTND4LP13-201ENST00000425022 298 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 AC092646.1-201ENST00000427142 901 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN1BQ07699 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC104629.2-201ENST00000468627 598 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC073648.3-201ENST00000504939 925 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC008429.2-201ENST00000523057 864 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN1BQ07699 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN1BQ07699 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC067805.1-201ENST00000559344 470 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 RN7SL208P-201ENST00000577964 296 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 RN7SL657P-201ENST00000582431 293 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.52□□□□□ -1.53
SCN1BQ07699 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC002069.2-201ENST00000603580 883 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 AC004890.3-201ENST00000605566 1095 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN1BQ07699 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN1BQ07699 AC117503.3-201ENST00000623811 601 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 AC018692.2-201ENST00000624130 348 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 AC061999.1-201ENST00000624454 177 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 AL035425.4-201ENST00000624509 1063 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 OR7E91P-202ENST00000642062 1198 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.52□□□□□ -1.53
SCN1BQ07699 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 MTCO1P15-201ENST00000529569 1526 ntBASIC5.52□□□□□ -1.53
SCN1BQ07699 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.52□□□□□ -1.53
SCN1BQ07699 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.52□□□□□ -1.53
SCN1BQ07699 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCN1BQ07699 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN1BQ07699 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN1BQ07699 PSMC1P4-201ENST00000515236 1327 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN1BQ07699 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN1BQ07699 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SCN1BQ07699 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SCN1BQ07699 SNORD65-201ENST00000391079 73 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 RANP6-201ENST00000413691 644 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 AL158827.1-201ENST00000416300 391 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 RPL18AP14-201ENST00000417685 526 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 MRPS21P5-201ENST00000417885 231 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms