Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNB3Q05901 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNB3Q05901 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNB3Q05901 AC024587.1-201ENST00000505925 2157 ntBASIC5.69□□□□□ -1.5
CHRNB3Q05901 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNB3Q05901 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
CHRNB3Q05901 AC099654.3-201ENST00000447087 1546 ntBASIC5.69□□□□□ -1.5
CHRNB3Q05901 THAP12P9-201ENST00000503971 2360 ntBASIC5.69□□□□□ -1.5
CHRNB3Q05901 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 PPBPP2-201ENST00000513150 1362 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC114774.1-201ENST00000507410 1770 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 AL158152.1-201ENST00000602652 1435 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC107977.1-201ENST00000355745 939 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 RNU1-49P-201ENST00000363468 159 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC245096.1-201ENST00000413104 546 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AL139158.1-201ENST00000424719 340 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 LINC00328-2P-201ENST00000436585 219 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 PPIAP10-201ENST00000438675 458 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 RSU1P1-201ENST00000453416 441 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 ACA64.4-201ENST00000459070 127 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC079080.1-201ENST00000479841 822 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC005017.1-201ENST00000482002 490 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AP001858.2-201ENST00000536213 601 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC107958.1-201ENST00000556576 290 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 PPIAP14-201ENST00000577627 496 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 MIR3154-201ENST00000577829 84 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC012368.3-201ENST00000604190 219 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC141002.1-201ENST00000607025 279 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC244517.3-201ENST00000616254 1235 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AP001052.1-201ENST00000626421 99 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 CASC19-274ENST00000642018 970 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 AC024651.2-201ENST00000562480 2098 ntBASIC5.68□□□□□ -1.5
CHRNB3Q05901 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNB3Q05901 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNB3Q05901 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNB3Q05901 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNB3Q05901 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CHRNB3Q05901 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNB3Q05901 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNB3Q05901 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNB3Q05901 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CHRNB3Q05901 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
CHRNB3Q05901 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.67□□□□□ -1.5
CHRNB3Q05901 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNB3Q05901 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNB3Q05901 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CHRNB3Q05901 OR56A4-201ENST00000330728 1209 ntBASIC5.67□□□□□ -1.5
CHRNB3Q05901 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNB3Q05901 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CHRNB3Q05901 RAB5CP1-201ENST00000395972 580 ntBASIC5.67□□□□□ -1.5
CHRNB3Q05901 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.67□□□□□ -1.5
CHRNB3Q05901 RN7SKP121-201ENST00000410842 305 ntBASIC5.67□□□□□ -1.5
CHRNB3Q05901 MYL6P5-201ENST00000412707 459 ntBASIC5.67□□□□□ -1.5
CHRNB3Q05901 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.67□□□□□ -1.5
CHRNB3Q05901 RPS7P14-201ENST00000426405 583 ntBASIC5.67□□□□□ -1.5
CHRNB3Q05901 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.67□□□□□ -1.5
CHRNB3Q05901 BX276092.6-201ENST00000430476 250 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms