Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC8.6□□□□□ -1.03
ATP7AQ04656 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ATP7AQ04656 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
ATP7AQ04656 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
ATP7AQ04656 CDY5P-201ENST00000411487 1580 ntBASIC8.6□□□□□ -1.03
ATP7AQ04656 CDY9P-201ENST00000451397 1580 ntBASIC8.6□□□□□ -1.03
ATP7AQ04656 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
ATP7AQ04656 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
ATP7AQ04656 RNU1-77P-201ENST00000390868 162 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC8.59□□□□□ -1.03
ATP7AQ04656 AC079922.1-201ENST00000443291 359 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
ATP7AQ04656 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.59□□□□□ -1.03
ATP7AQ04656 AC079841.1-201ENST00000481228 950 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 AC090638.1-201ENST00000498296 909 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 PGAM1P13-201ENST00000507497 754 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 AC021678.3-201ENST00000517893 476 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 TPM3P3-201ENST00000521343 354 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.59□□□□□ -1.03
ATP7AQ04656 MIR132-201ENST00000591554 101 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
ATP7AQ04656 IMMTP1-201ENST00000435590 2219 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.59□□□□□ -1.03
ATP7AQ04656 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
ATP7AQ04656 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
ATP7AQ04656 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
ATP7AQ04656 RNA5SP333-201ENST00000363466 118 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 RNA5SP334-201ENST00000364825 118 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
ATP7AQ04656 AL109941.1-201ENST00000401925 229 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.59□□□□□ -1.03
ATP7AQ04656 SLC35E1P1-201ENST00000419313 864 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 RPA2P2-201ENST00000419698 796 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 AC108075.1-201ENST00000424692 529 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.59□□□□□ -1.03
ATP7AQ04656 OR6D1P-201ENST00000436165 939 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC8.59□□□□□ -1.03
ATP7AQ04656 RPL15P21-201ENST00000495592 567 ntBASIC8.59□□□□□ -1.03
ATP7AQ04656 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.59□□□□□ -1.03
ATP7AQ04656 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC8.59□□□□□ -1.03
ATP7AQ04656 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.59□□□□□ -1.03
ATP7AQ04656 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.59□□□□□ -1.03
ATP7AQ04656 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
ATP7AQ04656 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.59□□□□□ -1.04
ATP7AQ04656 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.04
ATP7AQ04656 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.04
ATP7AQ04656 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.58□□□□□ -1.04
ATP7AQ04656 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.58□□□□□ -1.04
ATP7AQ04656 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 AL133243.4-201ENST00000623116 3109 ntBASIC8.58□□□□□ -1.04
ATP7AQ04656 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC8.58□□□□□ -1.04
ATP7AQ04656 AC130304.1-201ENST00000622942 2385 ntBASIC8.58□□□□□ -1.04
ATP7AQ04656 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
ATP7AQ04656 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
ATP7AQ04656 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
ATP7AQ04656 RNA5SP319-201ENST00000362768 119 ntBASIC8.58□□□□□ -1.04
ATP7AQ04656 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.58□□□□□ -1.04
ATP7AQ04656 MIR550A3-201ENST00000390735 95 ntBASIC8.58□□□□□ -1.04
ATP7AQ04656 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.58□□□□□ -1.04
ATP7AQ04656 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.58□□□□□ -1.04
ATP7AQ04656 ACA64.4-201ENST00000459070 127 ntBASIC8.58□□□□□ -1.04
ATP7AQ04656 AC026254.2-201ENST00000475295 371 ntBASIC8.58□□□□□ -1.04
ATP7AQ04656 AC105420.1-201ENST00000504389 582 ntBASIC8.58□□□□□ -1.04
ATP7AQ04656 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.58□□□□□ -1.04
ATP7AQ04656 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.58□□□□□ -1.04
ATP7AQ04656 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.58□□□□□ -1.04
ATP7AQ04656 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.58□□□□□ -1.04
ATP7AQ04656 AL049779.2-201ENST00000553847 315 ntBASIC8.58□□□□□ -1.04
ATP7AQ04656 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.58□□□□□ -1.04
ATP7AQ04656 AC000068.2-201ENST00000608816 460 ntBASIC8.58□□□□□ -1.04
ATP7AQ04656 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
ATP7AQ04656 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
ATP7AQ04656 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ATP7AQ04656 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
ATP7AQ04656 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ATP7AQ04656 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATP7AQ04656 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
ATP7AQ04656 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
ATP7AQ04656 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATP7AQ04656 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ATP7AQ04656 RN7SKP213-201ENST00000410746 298 ntBASIC8.57□□□□□ -1.04
ATP7AQ04656 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC8.57□□□□□ -1.04
ATP7AQ04656 AC009784.1-201ENST00000426484 460 ntBASIC8.57□□□□□ -1.04
ATP7AQ04656 FABP7P2-201ENST00000429946 379 ntBASIC8.57□□□□□ -1.04
ATP7AQ04656 RPL7L1P9-201ENST00000431298 745 ntBASIC8.57□□□□□ -1.04
ATP7AQ04656 RN7SL352P-201ENST00000466002 277 ntBASIC8.57□□□□□ -1.04
ATP7AQ04656 AC004453.1-201ENST00000487895 408 ntBASIC8.57□□□□□ -1.04
ATP7AQ04656 AP000676.2-201ENST00000529711 301 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms