Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRKDCP78527 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PRKDCP78527 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PRKDCP78527 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRKDCP78527 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRKDCP78527 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC4.02□□□□□ -1.77
PRKDCP78527 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC4.02□□□□□ -1.77
PRKDCP78527 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC4.02□□□□□ -1.77
PRKDCP78527 MYH13-201ENST00000252172 5992 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRKDCP78527 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
PRKDCP78527 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.02□□□□□ -1.77
PRKDCP78527 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRKDCP78527 U3.22-201ENST00000391120 215 ntBASIC4.02□□□□□ -1.77
PRKDCP78527 AC025750.1-201ENST00000399891 379 ntBASIC4.02□□□□□ -1.77
PRKDCP78527 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRKDCP78527 AC015983.1-201ENST00000441577 373 ntBASIC4.02□□□□□ -1.77
PRKDCP78527 NPM1P27-201ENST00000502784 830 ntBASIC4.02□□□□□ -1.77
PRKDCP78527 OR56A7P-201ENST00000524865 941 ntBASIC4.02□□□□□ -1.77
PRKDCP78527 SCARNA9-201ENST00000530422 353 ntBASIC4.02□□□□□ -1.77
PRKDCP78527 AC139493.1-201ENST00000604368 397 ntBASIC4.02□□□□□ -1.77
PRKDCP78527 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.02□□□□□ -1.77
PRKDCP78527 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PRKDCP78527 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC4.01□□□□□ -1.77
PRKDCP78527 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PRKDCP78527 HS6ST3-202ENST00000620595 7073 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKDCP78527 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 POU6F1-202ENST00000389243 4698 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKDCP78527 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PRKDCP78527 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 AC093720.1-201ENST00000505681 714 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 RNA5SP400-201ENST00000517155 111 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC4.01□□□□□ -1.77
PRKDCP78527 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKDCP78527 AC106730.2-201ENST00000566641 540 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKDCP78527 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PRKDCP78527 SFTPD-AS1-201ENST00000608229 5001 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKDCP78527 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 RNU1-149P-201ENST00000390870 161 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PRKDCP78527 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PRKDCP78527 DNAJC19P7-201ENST00000428811 344 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKDCP78527 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKDCP78527 RPL5P25-201ENST00000441148 775 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 AL359073.1-201ENST00000448036 403 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKDCP78527 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKDCP78527 AC021483.2-201ENST00000567415 758 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.01□□□□□ -1.77
PRKDCP78527 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 MIR6830-201ENST00000636015 70 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKDCP78527 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKDCP78527 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 RNA5SP332-201ENST00000391063 115 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKDCP78527 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKDCP78527 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PRKDCP78527 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKDCP78527 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKDCP78527 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms