Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HDAC4P56524 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
HDAC4P56524 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.47□□□□□ -1.37
HDAC4P56524 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HDAC4P56524 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.47□□□□□ -1.37
HDAC4P56524 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HDAC4P56524 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.47□□□□□ -1.37
HDAC4P56524 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.46□□□□□ -1.37
HDAC4P56524 NLRP3P1-201ENST00000622303 1785 ntBASIC6.46□□□□□ -1.37
HDAC4P56524 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
HDAC4P56524 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
HDAC4P56524 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.46□□□□□ -1.37
HDAC4P56524 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
HDAC4P56524 AC005261.6-201ENST00000623072 1387 ntBASIC6.46□□□□□ -1.37
HDAC4P56524 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HDAC4P56524 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.46□□□□□ -1.37
HDAC4P56524 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.46□□□□□ -1.37
HDAC4P56524 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.46□□□□□ -1.38
HDAC4P56524 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HDAC4P56524 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HDAC4P56524 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HDAC4P56524 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HDAC4P56524 AL451046.1-201ENST00000406097 534 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.46□□□□□ -1.38
HDAC4P56524 RN7SKP108-201ENST00000411367 328 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 HMGA1P8-201ENST00000414130 321 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 AC245884.2-201ENST00000426257 404 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 AL590004.3-202ENST00000445883 451 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.46□□□□□ -1.38
HDAC4P56524 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.46□□□□□ -1.38
HDAC4P56524 RPL34P33-201ENST00000486062 334 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HDAC4P56524 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.46□□□□□ -1.38
HDAC4P56524 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.46□□□□□ -1.38
HDAC4P56524 Y_RNA.710-201ENST00000516975 110 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.46□□□□□ -1.38
HDAC4P56524 OR6M2P-201ENST00000529831 871 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.46□□□□□ -1.38
HDAC4P56524 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.46□□□□□ -1.38
HDAC4P56524 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.46□□□□□ -1.38
HDAC4P56524 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.46□□□□□ -1.38
HDAC4P56524 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.46□□□□□ -1.38
HDAC4P56524 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.46□□□□□ -1.38
HDAC4P56524 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.46□□□□□ -1.38
HDAC4P56524 AL135999.3-201ENST00000610501 812 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HDAC4P56524 AL137067.2-201ENST00000621202 131 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HDAC4P56524 AC024651.2-201ENST00000562480 2098 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
HDAC4P56524 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.46□□□□□ -1.38
HDAC4P56524 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HDAC4P56524 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HDAC4P56524 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.46□□□□□ -1.38
HDAC4P56524 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HDAC4P56524 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.46□□□□□ -1.38
HDAC4P56524 EIF3EP1-201ENST00000433978 1316 ntBASIC6.46□□□□□ -1.38
HDAC4P56524 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.46□□□□□ -1.38
HDAC4P56524 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
HDAC4P56524 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HDAC4P56524 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HDAC4P56524 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
HDAC4P56524 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
HDAC4P56524 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
HDAC4P56524 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC4P56524 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.45□□□□□ -1.38
HDAC4P56524 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.45□□□□□ -1.38
HDAC4P56524 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 AL035422.1-201ENST00000414193 397 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 RPS17P17-201ENST00000419392 409 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC4P56524 REREP1Y-201ENST00000422655 198 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
HDAC4P56524 MRPS21P2-201ENST00000424704 264 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 AC099782.1-201ENST00000425889 474 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.45□□□□□ -1.38
HDAC4P56524 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC4P56524 REREP2Y-201ENST00000439103 200 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 AL645936.1-201ENST00000441979 518 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 CYCSP51-201ENST00000443545 318 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 AC007383.1-201ENST00000445875 636 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC4P56524 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC4P56524 SNX18P25-201ENST00000510539 758 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 NPM1P21-201ENST00000513394 762 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 HMGN1P17-201ENST00000513734 295 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 ACTR6P1-201ENST00000514311 1104 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 AC078878.1-201ENST00000539832 958 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.45□□□□□ -1.38
HDAC4P56524 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.45□□□□□ -1.38
HDAC4P56524 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.45□□□□□ -1.38
HDAC4P56524 MIR3908-201ENST00000579798 126 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 RNU4ATAC-201ENST00000580972 127 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 AC016911.1-201ENST00000613297 452 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 AL391597.1-201ENST00000618707 694 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 AC006213.5-201ENST00000619673 288 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 AC116667.2-201ENST00000641075 823 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms