Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC005261.2-201ENST00000593427 4258 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 OR10AB1P-202ENST00000641219 1686 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 U3.4-201ENST00000363352 213 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 snosnR66.1-201ENST00000391095 99 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 RNU6-932P-201ENST00000391108 106 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 SNORA3.1-201ENST00000408166 111 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 RNA5SP155-201ENST00000411154 129 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AC092570.2-201ENST00000452117 1143 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 SEPT7P3-201ENST00000455017 621 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 RPS3AP49-201ENST00000472161 790 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 SUMO1P1-201ENST00000497904 306 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 RN7SKP11-201ENST00000517018 287 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 ADI1P3-201ENST00000549509 470 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 HIGD1AP17-201ENST00000554576 276 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AC079315.1-201ENST00000602952 623 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AC015982.1-201ENST00000608113 465 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 SAMMSON-209ENST00000641222 1100 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 OR2AH1P-202ENST00000641232 2744 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AL137058.3-201ENST00000624531 3099 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 QRSL1P1-201ENST00000400977 1540 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 AC018992.1-201ENST00000523778 2149 ntBASIC8.82□□□□□ -1
ZC3H4Q9UPT8 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.82□□□□□ -1
ZC3H4Q9UPT8 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 XKRYP4-201ENST00000414395 483 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 BX119917.1-201ENST00000432517 502 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms