RNA–Protein interactions for RNA: ENST00000554576.2

HIGD1AP17-201, Transcript of HIG1 hypoxia inducible domain family member 1A pseudogene 17, humanhuman

BASIC

Gene HIGD1AP17, Length 276 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1AP17-201ENST00000554576 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
HIGD1AP17-201ENST00000554576 CHIC1Q5VXU3 224 aa21.74■■□□□ 1.07
HIGD1AP17-201ENST00000554576 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
HIGD1AP17-201ENST00000554576 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
HIGD1AP17-201ENST00000554576 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
HIGD1AP17-201ENST00000554576 FOXD1Q16676 465 aa17.38■□□□□ 0.37
HIGD1AP17-201ENST00000554576 ADRA2BP18089 450 aa16.74■□□□□ 0.27
HIGD1AP17-201ENST00000554576 PPP6R1Q9UPN7 881 aa16.74■□□□□ 0.27
HIGD1AP17-201ENST00000554576 PIAS4Q8N2W9 510 aaPredicted RBP16.46■□□□□ 0.23
HIGD1AP17-201ENST00000554576 MSH5O43196 834 aa16.14■□□□□ 0.17
HIGD1AP17-201ENST00000554576 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
HIGD1AP17-201ENST00000554576 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
HIGD1AP17-201ENST00000554576 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
HIGD1AP17-201ENST00000554576 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
HIGD1AP17-201ENST00000554576 KCNA4P22459 653 aa15.26■□□□□ 0.03
HIGD1AP17-201ENST00000554576 CNKSR2Q8WXI2 1034 aa15.19■□□□□ 0.02
HIGD1AP17-201ENST00000554576 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
HIGD1AP17-201ENST00000554576 DMRT2Q9Y5R5 561 aa15.04■□□□□ -0
HIGD1AP17-201ENST00000554576 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
HIGD1AP17-201ENST00000554576 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
HIGD1AP17-201ENST00000554576 HOXD11P31277 338 aaPredicted RBP14.77□□□□□ -0.05
HIGD1AP17-201ENST00000554576 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
HIGD1AP17-201ENST00000554576 SLC4A1APQ9BWU0 796 aaKnown RBP14.61□□□□□ -0.07
HIGD1AP17-201ENST00000554576 DCAF8L1A6NGE4 600 aa14.32□□□□□ -0.12
HIGD1AP17-201ENST00000554576 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
HIGD1AP17-201ENST00000554576 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
HIGD1AP17-201ENST00000554576 SLC4A2P04920 1241 aa14.07□□□□□ -0.16
HIGD1AP17-201ENST00000554576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.16
HIGD1AP17-201ENST00000554576 CSRNP3Q8WYN3 585 aa14.03□□□□□ -0.16
HIGD1AP17-201ENST00000554576 ZBTB22O15209 634 aa14□□□□□ -0.17
HIGD1AP17-201ENST00000554576 MYCNP04198 464 aaPredicted RBP13.91□□□□□ -0.18
HIGD1AP17-201ENST00000554576 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
HIGD1AP17-201ENST00000554576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.2
HIGD1AP17-201ENST00000554576 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
HIGD1AP17-201ENST00000554576 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
HIGD1AP17-201ENST00000554576 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
HIGD1AP17-201ENST00000554576 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
HIGD1AP17-201ENST00000554576 ATXN8OSP0DMR3 200 aa13.7□□□□□ -0.22
HIGD1AP17-201ENST00000554576 APLP2Q06481 763 aa13.7□□□□□ -0.22
HIGD1AP17-201ENST00000554576 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
HIGD1AP17-201ENST00000554576 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
HIGD1AP17-201ENST00000554576 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
HIGD1AP17-201ENST00000554576 CAPN15O75808 1086 aa13.35□□□□□ -0.27
HIGD1AP17-201ENST00000554576 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
HIGD1AP17-201ENST00000554576 TRHP20396 242 aaPredicted RBP13.28□□□□□ -0.28
HIGD1AP17-201ENST00000554576 DSG3P32926 999 aa13.1□□□□□ -0.31
HIGD1AP17-201ENST00000554576 POLA2Q14181 598 aa13.1□□□□□ -0.31
HIGD1AP17-201ENST00000554576 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
HIGD1AP17-201ENST00000554576 ABCB7O75027 752 aa13.04□□□□□ -0.32
HIGD1AP17-201ENST00000554576 FBLN2P98095 1184 aa12.98□□□□□ -0.33
HIGD1AP17-201ENST00000554576 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
HIGD1AP17-201ENST00000554576 FKBP8Q14318 412 aa12.7□□□□□ -0.38
HIGD1AP17-201ENST00000554576 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
HIGD1AP17-201ENST00000554576 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
HIGD1AP17-201ENST00000554576 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
HIGD1AP17-201ENST00000554576 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
HIGD1AP17-201ENST00000554576 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
HIGD1AP17-201ENST00000554576 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
HIGD1AP17-201ENST00000554576 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
HIGD1AP17-201ENST00000554576 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.41
HIGD1AP17-201ENST00000554576 POTEHQ6S545 545 aa12.5□□□□□ -0.41
HIGD1AP17-201ENST00000554576 PROM2Q8N271 834 aa12.48□□□□□ -0.41
HIGD1AP17-201ENST00000554576 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
HIGD1AP17-201ENST00000554576 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
HIGD1AP17-201ENST00000554576 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
HIGD1AP17-201ENST00000554576 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
HIGD1AP17-201ENST00000554576 SPDYE1Q8NFV5 336 aaPredicted RBP12.25□□□□□ -0.45
HIGD1AP17-201ENST00000554576 REM2Q8IYK8 340 aaPredicted RBP12.24□□□□□ -0.45
HIGD1AP17-201ENST00000554576 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
HIGD1AP17-201ENST00000554576 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
HIGD1AP17-201ENST00000554576 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
HIGD1AP17-201ENST00000554576 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
HIGD1AP17-201ENST00000554576 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
HIGD1AP17-201ENST00000554576 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
HIGD1AP17-201ENST00000554576 MIER1Q8N108 512 aa11.98□□□□□ -0.49
HIGD1AP17-201ENST00000554576 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
HIGD1AP17-201ENST00000554576 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
HIGD1AP17-201ENST00000554576 FXR2P51116 673 aaKnown RBP eCLIP11.88□□□□□ -0.51
HIGD1AP17-201ENST00000554576 IFNLR1Q8IU57 520 aaPredicted RBP11.88□□□□□ -0.51
HIGD1AP17-201ENST00000554576 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
HIGD1AP17-201ENST00000554576 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
HIGD1AP17-201ENST00000554576 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
HIGD1AP17-201ENST00000554576 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
HIGD1AP17-201ENST00000554576 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
HIGD1AP17-201ENST00000554576 NPM1P06748 294 aaKnown RBP eCLIP11.79□□□□□ -0.52
HIGD1AP17-201ENST00000554576 PRKAR2AP13861 404 aaKnown RBP11.79□□□□□ -0.52
HIGD1AP17-201ENST00000554576 MNX1P50219 401 aaPredicted RBP11.76□□□□□ -0.53
HIGD1AP17-201ENST00000554576 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
HIGD1AP17-201ENST00000554576 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
HIGD1AP17-201ENST00000554576 NUBP1P53384 320 aa11.65□□□□□ -0.54
HIGD1AP17-201ENST00000554576 GSE1Q14687 1217 aa11.64□□□□□ -0.55
HIGD1AP17-201ENST00000554576 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
HIGD1AP17-201ENST00000554576 FAM212AQ96EL1 285 aa11.63□□□□□ -0.55
HIGD1AP17-201ENST00000554576 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
HIGD1AP17-201ENST00000554576 SP7Q8TDD2 431 aaPredicted RBP11.59□□□□□ -0.55
HIGD1AP17-201ENST00000554576 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
HIGD1AP17-201ENST00000554576 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
HIGD1AP17-201ENST00000554576 CIZ1Q9ULV3 898 aaPredicted RBP11.56□□□□□ -0.56
HIGD1AP17-201ENST00000554576 DCAF8Q5TAQ9 597 aa11.55□□□□□ -0.56
HIGD1AP17-201ENST00000554576 PKD2Q13563 968 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms