Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A2P05997 AC024589.2-201ENST00000605642 1294 ntBASIC7.69□□□□□ -1.18
COL5A2P05997 AL121612.2-201ENST00000612261 482 ntBASIC7.69□□□□□ -1.18
COL5A2P05997 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
COL5A2P05997 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.69□□□□□ -1.18
COL5A2P05997 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A2P05997 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
COL5A2P05997 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A2P05997 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A2P05997 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
COL5A2P05997 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
COL5A2P05997 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A2P05997 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
COL5A2P05997 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A2P05997 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
COL5A2P05997 AC007938.2-201ENST00000604666 2634 ntBASIC7.69□□□□□ -1.18
COL5A2P05997 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A2P05997 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A2P05997 AC006213.6-201ENST00000623722 4179 ntBASIC7.69□□□□□ -1.18
COL5A2P05997 AC023421.1-201ENST00000590535 1785 ntBASIC7.69□□□□□ -1.18
COL5A2P05997 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A2P05997 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A2P05997 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A2P05997 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A2P05997 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.68□□□□□ -1.18
COL5A2P05997 MIR550A3-201ENST00000390735 95 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.68□□□□□ -1.18
COL5A2P05997 GAPDHP42-201ENST00000406848 981 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 SLC35E1P1-201ENST00000419313 864 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 RPA2P2-201ENST00000419698 796 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 AC005033.1-201ENST00000428904 813 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.68□□□□□ -1.18
COL5A2P05997 PSMD10P3-201ENST00000437000 448 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 AL450996.1-201ENST00000445574 1202 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.68□□□□□ -1.18
COL5A2P05997 RAB28P2-201ENST00000454299 641 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 RPSAP50-201ENST00000481955 852 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 RPS21P4-201ENST00000487122 248 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.68□□□□□ -1.18
COL5A2P05997 RPL15P21-201ENST00000495592 567 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 CCDC11P1-201ENST00000503137 1162 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.68□□□□□ -1.18
COL5A2P05997 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.68□□□□□ -1.18
COL5A2P05997 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.68□□□□□ -1.18
COL5A2P05997 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.68□□□□□ -1.18
COL5A2P05997 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.68□□□□□ -1.18
COL5A2P05997 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
COL5A2P05997 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
COL5A2P05997 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.68□□□□□ -1.18
COL5A2P05997 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 AL161912.4-201ENST00000623889 2468 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
COL5A2P05997 CASC19-205ENST00000641013 1411 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
COL5A2P05997 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 FBXL21-201ENST00000297158 1305 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
COL5A2P05997 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL5A2P05997 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.68□□□□□ -1.18
COL5A2P05997 RPL7L1P9-201ENST00000431298 745 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 CYCSP6-201ENST00000434498 302 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.68□□□□□ -1.18
COL5A2P05997 BX284632.1-201ENST00000478218 541 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 RPL23AP40-201ENST00000487630 390 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.68□□□□□ -1.18
COL5A2P05997 AC072052.1-201ENST00000496556 306 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.68□□□□□ -1.18
COL5A2P05997 AC021678.3-201ENST00000517893 476 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.68□□□□□ -1.18
COL5A2P05997 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.68□□□□□ -1.18
COL5A2P05997 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.68□□□□□ -1.18
COL5A2P05997 AC090510.2-201ENST00000617465 629 ntBASIC7.68□□□□□ -1.18
COL5A2P05997 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL5A2P05997 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL5A2P05997 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL5A2P05997 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
COL5A2P05997 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL5A2P05997 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.67□□□□□ -1.18
COL5A2P05997 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.67□□□□□ -1.18
COL5A2P05997 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
COL5A2P05997 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.67□□□□□ -1.18
COL5A2P05997 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.67□□□□□ -1.18
COL5A2P05997 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.67□□□□□ -1.18
COL5A2P05997 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
COL5A2P05997 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL5A2P05997 AC079753.1-201ENST00000623243 3868 ntBASIC7.67□□□□□ -1.18
COL5A2P05997 RNA5SP319-201ENST00000362768 119 ntBASIC7.67□□□□□ -1.18
COL5A2P05997 RNU1-106P-201ENST00000384382 164 ntBASIC7.67□□□□□ -1.18
COL5A2P05997 AL121835.1-201ENST00000404250 354 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms