Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGN1P05114 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGN1P05114 CYCSP25-201ENST00000525280 316 ntBASIC5.48□□□□□ -1.53
HMGN1P05114 AC084851.2-201ENST00000530377 364 ntBASIC5.48□□□□□ -1.53
HMGN1P05114 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGN1P05114 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.48□□□□□ -1.53
HMGN1P05114 AC007346.2-201ENST00000564816 892 ntBASIC5.48□□□□□ -1.53
HMGN1P05114 AL163952.1-202ENST00000569625 600 ntBASIC5.48□□□□□ -1.53
HMGN1P05114 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGN1P05114 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGN1P05114 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGN1P05114 AC119403.2-201ENST00000590960 598 ntBASIC5.48□□□□□ -1.53
HMGN1P05114 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
HMGN1P05114 MIR6811-201ENST00000620409 58 ntBASIC5.48□□□□□ -1.53
HMGN1P05114 AC103703.1-201ENST00000634783 663 ntBASIC5.48□□□□□ -1.53
HMGN1P05114 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HMGN1P05114 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGN1P05114 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGN1P05114 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGN1P05114 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HMGN1P05114 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGN1P05114 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGN1P05114 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGN1P05114 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGN1P05114 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGN1P05114 FANCD2P2-201ENST00000437591 1400 ntBASIC5.48□□□□□ -1.53
HMGN1P05114 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
HMGN1P05114 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGN1P05114 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
HMGN1P05114 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 AC003985.2-201ENST00000562268 1669 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 ADAM24P-201ENST00000398655 2101 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMGN1P05114 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGN1P05114 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.47□□□□□ -1.53
HMGN1P05114 RNU105B-201ENST00000364478 208 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 RNA5SP485-201ENST00000365053 119 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 AC092634.1-201ENST00000366505 199 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.47□□□□□ -1.53
HMGN1P05114 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HMGN1P05114 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGN1P05114 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGN1P05114 GM2AP2-201ENST00000491764 562 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 AC090958.1-201ENST00000511122 351 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 RN7SKP288-201ENST00000516227 268 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGN1P05114 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGN1P05114 OR9G2P-201ENST00000533326 880 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 AC068993.1-201ENST00000546724 589 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 AL390334.1-201ENST00000556395 450 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 AC060780.2-201ENST00000589047 198 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 OR7E19P-202ENST00000589942 844 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGN1P05114 MIR6849-201ENST00000618543 69 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 SNX18P12-201ENST00000624821 759 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 AC068213.1-201ENST00000625124 226 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMGN1P05114 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HMGN1P05114 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 SAMMSON-213ENST00000641336 1521 ntBASIC5.47□□□□□ -1.53
HMGN1P05114 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGN1P05114 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HMGN1P05114 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HMGN1P05114 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGN1P05114 AL449283.1-201ENST00000602631 3403 ntBASIC5.46□□□□□ -1.53
HMGN1P05114 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.46□□□□□ -1.53
HMGN1P05114 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
HMGN1P05114 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.46□□□□□ -1.53
HMGN1P05114 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HMGN1P05114 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HMGN1P05114 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.46□□□□□ -1.54
HMGN1P05114 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.46□□□□□ -1.54
HMGN1P05114 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.46□□□□□ -1.54
HMGN1P05114 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HMGN1P05114 RNA5SP346-201ENST00000363541 121 ntBASIC5.46□□□□□ -1.54
HMGN1P05114 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.46□□□□□ -1.54
HMGN1P05114 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.46□□□□□ -1.54
HMGN1P05114 VIM2P-201ENST00000402383 1294 ntBASIC5.46□□□□□ -1.54
HMGN1P05114 RN7SKP144-201ENST00000411108 279 ntBASIC5.46□□□□□ -1.54
HMGN1P05114 METTL15P3-201ENST00000415522 1221 ntBASIC5.46□□□□□ -1.54
HMGN1P05114 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.46□□□□□ -1.54
HMGN1P05114 RPS15AP30-201ENST00000420976 390 ntBASIC5.46□□□□□ -1.54
HMGN1P05114 AC113412.1-201ENST00000425840 504 ntBASIC5.46□□□□□ -1.54
HMGN1P05114 HSPE1P16-201ENST00000426640 348 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms