Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL359976.1-201ENST00000418655 3528 ntBASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 ABCA11P-202ENST00000504019 2110 ntBASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 RPL7P6-201ENST00000480903 738 ntBASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AC015864.1-201ENST00000496512 544 ntBASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 PRELID3BP5-201ENST00000508612 460 ntBASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AC004825.1-201ENST00000555068 586 ntBASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 AC009962.1-201ENST00000567327 3813 ntBASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
ALMS1Q8TCU4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC147055.3-201ENST00000510547 851 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AL133406.3-201ENST00000606817 541 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC068831.8-201ENST00000620171 435 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 CASC19-248ENST00000641674 1356 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 RPL31P44-201ENST00000447680 377 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 RPL7P61-201ENST00000451721 751 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 SDC4P-201ENST00000453285 601 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC008897.1-201ENST00000494006 347 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 HMGA1P8-201ENST00000414130 321 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC126120.1-201ENST00000431082 470 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 RPL32P33-201ENST00000487023 394 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC114728.1-201ENST00000488289 483 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC095057.1-201ENST00000507583 168 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 OR51K1P-201ENST00000510214 950 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 GSTP1P1-201ENST00000548078 319 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 uc_338.26-201ENST00000612659 160 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms