Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC087468.1-201ENST00000604365 630 ntBASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 AL163642.2-201ENST00000604722 1019 ntBASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 AC138749.5-201ENST00000611461 208 ntBASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 SPATA31C1-201ENST00000420021 3895 ntBASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 AC004023.1-201ENST00000561473 1744 ntBASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SHKBP1Q8TBC3 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 FAM204BP-201ENST00000369171 701 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 MIR1266-201ENST00000408125 84 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AP003385.1-201ENST00000426387 893 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AL589880.1-201ENST00000448271 287 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 RHEBP2-201ENST00000450289 600 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 UOX-201ENST00000471089 899 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 SYPL1P1-201ENST00000473622 768 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AC011825.1-201ENST00000484967 388 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 SNX18P25-201ENST00000510539 758 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 PGAM4P2-201ENST00000512491 721 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 RNU6-528P-201ENST00000516926 100 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AP005597.2-201ENST00000526238 341 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 OR9L1P-201ENST00000529493 933 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 RPL41P2-201ENST00000544920 409 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AL158063.1-201ENST00000615349 536 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AC211486.4-201ENST00000621495 113 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 AC061975.5-201ENST00000584928 1441 ntBASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHKBP1Q8TBC3 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 AC061975.7-201ENST00000592016 2692 ntBASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
SHKBP1Q8TBC3 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SHKBP1Q8TBC3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms