Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HMGB3P6-201ENST00000444896 598 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AL606662.1-201ENST00000445763 553 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 ZNF619P1-201ENST00000446539 752 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC008280.2-201ENST00000455473 307 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 RN7SL83P-201ENST00000468131 297 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 OR9N1P-201ENST00000491296 333 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 HNRNPA1P44-201ENST00000503999 879 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC093677.1-201ENST00000514414 678 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 SCARNA21.2-201ENST00000516600 166 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 BUD31P1-201ENST00000521828 359 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 OR4C7P-201ENST00000533375 919 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 SETP17-201ENST00000534163 817 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC087897.1-201ENST00000550134 156 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 NTS-203ENST00000551529 801 ntTSL 3 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 CFL2-206ENST00000556161 546 ntTSL 4 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC012414.6-201ENST00000568241 401 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AL391497.1-201ENST00000608671 547 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 ST5-237ENST00000530991 3396 ntTSL 2 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 MRRFP1-201ENST00000435941 1675 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 MTHFD2P5-201ENST00000320415 844 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 RNU4-21P-201ENST00000362802 126 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 RNU6-839P-201ENST00000363347 108 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 SNORA70.5-201ENST00000365519 135 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 RN7SKP58-201ENST00000411010 305 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC093155.1-201ENST00000440164 826 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC093166.3-201ENST00000448785 303 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 TMED11P-201ENST00000479478 690 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 MTCYBP18-201ENST00000501056 747 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC093816.1-201ENST00000515076 913 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 MTCO1P35-201ENST00000515270 228 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 RNA5SP518-201ENST00000515957 119 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 NDUFS5P6-201ENST00000529136 295 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 DUXAP1-201ENST00000556632 463 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC135626.1-201ENST00000556983 435 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 MT1CP-201ENST00000567054 174 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC007151.1-201ENST00000572774 483 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC011260.1-201ENST00000578420 472 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC005726.4-201ENST00000582858 458 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC000068.3-201ENST00000607934 427 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AL159169.2-201ENST00000610061 1269 ntBASIC7.23□□□□□ -1.25
RSPO4Q2I0M5 AC091304.9-201ENST00000612091 226 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms