Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.16□□□□□ -1.26
NID1P14543 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.16□□□□□ -1.26
NID1P14543 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NID1P14543 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NID1P14543 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NID1P14543 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
NID1P14543 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
NID1P14543 AC096745.2-201ENST00000627783 1914 ntBASIC7.15□□□□□ -1.26
NID1P14543 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.15□□□□□ -1.26
NID1P14543 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
NID1P14543 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
NID1P14543 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NID1P14543 AC018992.1-201ENST00000523778 2149 ntBASIC7.15□□□□□ -1.26
NID1P14543 THAP12P7-201ENST00000520248 2290 ntBASIC7.15□□□□□ -1.26
NID1P14543 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.15□□□□□ -1.26
NID1P14543 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
NID1P14543 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NID1P14543 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
NID1P14543 Y_RNA.372-201ENST00000365599 102 ntBASIC7.15□□□□□ -1.26
NID1P14543 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 Y_RNA.460-201ENST00000384255 102 ntBASIC7.15□□□□□ -1.26
NID1P14543 SNORA70I-201ENST00000384544 135 ntBASIC7.15□□□□□ -1.26
NID1P14543 GSTA12P-201ENST00000402398 508 ntBASIC7.15□□□□□ -1.26
NID1P14543 PRELID1P2-201ENST00000407805 396 ntBASIC7.15□□□□□ -1.26
NID1P14543 CTSLP8-201ENST00000413075 967 ntBASIC7.15□□□□□ -1.26
NID1P14543 TPT1P2-201ENST00000413105 503 ntBASIC7.15□□□□□ -1.26
NID1P14543 TAF13P2-201ENST00000416876 286 ntBASIC7.15□□□□□ -1.26
NID1P14543 RPL23AP34-201ENST00000423483 410 ntBASIC7.15□□□□□ -1.26
NID1P14543 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7.15□□□□□ -1.26
NID1P14543 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.15□□□□□ -1.26
NID1P14543 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NID1P14543 MTND4LP10-201ENST00000435146 291 ntBASIC7.15□□□□□ -1.26
NID1P14543 PHBP4-201ENST00000437447 837 ntBASIC7.15□□□□□ -1.26
NID1P14543 AL158214.1-201ENST00000444423 404 ntBASIC7.15□□□□□ -1.26
NID1P14543 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.15□□□□□ -1.26
NID1P14543 AC013267.1-201ENST00000458227 267 ntBASIC7.15□□□□□ -1.26
NID1P14543 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NID1P14543 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC7.15□□□□□ -1.26
NID1P14543 NTAN1P2-201ENST00000515730 940 ntBASIC7.15□□□□□ -1.26
NID1P14543 Y_RNA.675-201ENST00000516389 149 ntBASIC7.15□□□□□ -1.26
NID1P14543 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC7.15□□□□□ -1.26
NID1P14543 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC7.15□□□□□ -1.26
NID1P14543 FAM92A1P1-201ENST00000528023 890 ntBASIC7.15□□□□□ -1.26
NID1P14543 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC7.15□□□□□ -1.26
NID1P14543 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.15□□□□□ -1.26
NID1P14543 THAP2-202ENST00000547843 672 ntTSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 COX4I1P1-201ENST00000554239 509 ntBASIC7.15□□□□□ -1.26
NID1P14543 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.15□□□□□ -1.26
NID1P14543 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.15□□□□□ -1.26
NID1P14543 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.15□□□□□ -1.26
NID1P14543 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 CYP2C60P-201ENST00000566088 139 ntBASIC7.15□□□□□ -1.26
NID1P14543 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NID1P14543 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.15□□□□□ -1.26
NID1P14543 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.15□□□□□ -1.26
NID1P14543 OR7A18P-201ENST00000600416 277 ntBASIC7.15□□□□□ -1.26
NID1P14543 AC103881.1-201ENST00000603476 538 ntBASIC7.15□□□□□ -1.26
NID1P14543 BNIP3P11-201ENST00000603878 563 ntBASIC7.15□□□□□ -1.26
NID1P14543 AC008277.2-201ENST00000605196 797 ntBASIC7.15□□□□□ -1.26
NID1P14543 AC008536.2-201ENST00000607284 349 ntBASIC7.15□□□□□ -1.26
NID1P14543 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC7.15□□□□□ -1.26
NID1P14543 AC123788.2-201ENST00000612290 283 ntBASIC7.15□□□□□ -1.26
NID1P14543 AL442067.2-201ENST00000614033 363 ntBASIC7.15□□□□□ -1.26
NID1P14543 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.15□□□□□ -1.26
NID1P14543 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.15□□□□□ -1.26
NID1P14543 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC7.15□□□□□ -1.26
NID1P14543 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 SSXP3-201ENST00000442971 1300 ntBASIC7.15□□□□□ -1.26
NID1P14543 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
NID1P14543 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.15□□□□□ -1.27
NID1P14543 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NID1P14543 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NID1P14543 AC245505.2-201ENST00000553572 3055 ntBASIC7.15□□□□□ -1.27
NID1P14543 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.15□□□□□ -1.27
NID1P14543 AC022306.1-201ENST00000560489 1562 ntBASIC7.15□□□□□ -1.27
NID1P14543 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.15□□□□□ -1.27
NID1P14543 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.15□□□□□ -1.27
NID1P14543 AC137056.2-201ENST00000624055 1958 ntBASIC7.15□□□□□ -1.27
NID1P14543 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
NID1P14543 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC7.15□□□□□ -1.27
NID1P14543 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
NID1P14543 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
NID1P14543 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.14□□□□□ -1.27
NID1P14543 MFSD8-227ENST00000641393 4069 ntBASIC7.14□□□□□ -1.27
NID1P14543 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
NID1P14543 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
NID1P14543 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
NID1P14543 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NID1P14543 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 256.7 ms