Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
SHANK2Q9UPX8 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.82□□□□□ -1
SHANK2Q9UPX8 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
SHANK2Q9UPX8 AC112243.1-201ENST00000623949 3851 ntBASIC8.81□□□□□ -1
SHANK2Q9UPX8 THAP12P9-201ENST00000503971 2360 ntBASIC8.81□□□□□ -1
SHANK2Q9UPX8 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SHANK2Q9UPX8 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
SHANK2Q9UPX8 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC8.81□□□□□ -1
SHANK2Q9UPX8 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SHANK2Q9UPX8 MRRFP1-201ENST00000435941 1675 ntBASIC8.81□□□□□ -1
SHANK2Q9UPX8 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC8.81□□□□□ -1
SHANK2Q9UPX8 AC005532.2-201ENST00000467154 373 ntBASIC8.81□□□□□ -1
SHANK2Q9UPX8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC8.81□□□□□ -1
SHANK2Q9UPX8 AC096754.1-201ENST00000508904 818 ntBASIC8.81□□□□□ -1
SHANK2Q9UPX8 IGBP1P1-201ENST00000554337 1009 ntBASIC8.81□□□□□ -1
SHANK2Q9UPX8 AC004836.1-201ENST00000623032 634 ntBASIC8.81□□□□□ -1
SHANK2Q9UPX8 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.81□□□□□ -1
SHANK2Q9UPX8 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SHANK2Q9UPX8 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.81□□□□□ -1
SHANK2Q9UPX8 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SHANK2Q9UPX8 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC8.81□□□□□ -1
SHANK2Q9UPX8 AL359922.2-201ENST00000581788 3017 ntBASIC8.81□□□□□ -1
SHANK2Q9UPX8 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
SHANK2Q9UPX8 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.81□□□□□ -1
SHANK2Q9UPX8 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC8.81□□□□□ -1
SHANK2Q9UPX8 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SHANK2Q9UPX8 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.8□□□□□ -1
SHANK2Q9UPX8 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SHANK2Q9UPX8 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.8□□□□□ -1
SHANK2Q9UPX8 LINC02019-201ENST00000608605 2060 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
SHANK2Q9UPX8 RNA5SP30-201ENST00000365552 115 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 EEF1A1P29-201ENST00000416082 1096 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 AL662874.1-201ENST00000426065 230 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 Z84478.1-201ENST00000438230 1219 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 RPL12P3-201ENST00000440080 396 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 AC115223.1-201ENST00000466377 870 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 AC009120.1-201ENST00000493458 473 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 HMGB1P42-201ENST00000532126 553 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 AL049779.3-201ENST00000557141 606 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC8.8□□□□□ -1
SHANK2Q9UPX8 ELOCP28-201ENST00000590044 317 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.8□□□□□ -1
SHANK2Q9UPX8 CYCSP1-201ENST00000604815 315 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 AC073342.3-201ENST00000624211 193 ntBASIC8.8□□□□□ -1
SHANK2Q9UPX8 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
SHANK2Q9UPX8 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.8□□□□□ -1
SHANK2Q9UPX8 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
SHANK2Q9UPX8 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.8□□□□□ -1
SHANK2Q9UPX8 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
SHANK2Q9UPX8 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.79□□□□□ -1
SHANK2Q9UPX8 RAD17P2-201ENST00000451754 1977 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SHANK2Q9UPX8 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SHANK2Q9UPX8 RN7SKP124-201ENST00000364730 341 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 RN7SKP59-201ENST00000410520 314 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 TMA16P2-201ENST00000413187 601 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 AC073610.1-201ENST00000489971 396 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 MIR3691-201ENST00000578066 90 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 MIR132-201ENST00000591554 101 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 MIR6820-201ENST00000611508 62 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 AC068870.2-201ENST00000620635 389 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 PABPC1P8-201ENST00000452851 2086 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.79□□□□□ -1
SHANK2Q9UPX8 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.79□□□□□ -1
SHANK2Q9UPX8 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.79□□□□□ -1
SHANK2Q9UPX8 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
SHANK2Q9UPX8 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SHANK2Q9UPX8 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 DOCK11P1-201ENST00000553480 5932 ntBASIC8.79□□□□□ -1
SHANK2Q9UPX8 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SHANK2Q9UPX8 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SHANK2Q9UPX8 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.79□□□□□ -1
SHANK2Q9UPX8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 HIST1H3PS1-201ENST00000404612 417 ntBASIC8.78□□□□□ -1
SHANK2Q9UPX8 MIR1286-201ENST00000408112 78 ntBASIC8.78□□□□□ -1
SHANK2Q9UPX8 AC007568.1-201ENST00000422912 471 ntBASIC8.78□□□□□ -1
SHANK2Q9UPX8 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8.78□□□□□ -1
SHANK2Q9UPX8 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC8.78□□□□□ -1
SHANK2Q9UPX8 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 LRRC37A14P-201ENST00000452297 462 ntBASIC8.78□□□□□ -1
SHANK2Q9UPX8 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.78□□□□□ -1
SHANK2Q9UPX8 AC007386.1-201ENST00000455212 582 ntBASIC8.78□□□□□ -1
SHANK2Q9UPX8 RN7SL184P-201ENST00000488308 297 ntBASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms