Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC215522.1-201ENST00000615488 446 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 BX510359.8-201ENST00000617713 296 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC005899.7-201ENST00000618199 588 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 MED15P6-202ENST00000621415 787 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 PAK6-201ENST00000260404 3865 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 RCAN1-204ENST00000399272 2164 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 OVGP1-201ENST00000369732 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 ABI1-208ENST00000376160 3515 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 DBF4P1-201ENST00000412976 1892 ntBASIC8.45□□□□□ -1.06
LHX6Q9UPM6 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 KDM2B-206ENST00000538046 2301 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LHX6Q9UPM6 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 LY9-201ENST00000263285 2443 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 ENTPD1-210ENST00000543964 1579 ntTSL 2 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 SYT1-202ENST00000393240 3095 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 ADAMTS12-201ENST00000352040 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 ABCC2-201ENST00000370434 1714 ntTSL 2 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AL022334.1-201ENST00000417397 1726 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 TTF1-203ENST00000612514 1780 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 RNU6-1339P-201ENST00000363574 91 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 Y_RNA.153-201ENST00000363615 91 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 RN7SKP76-201ENST00000364419 323 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 RPL11-201ENST00000374550 634 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 GAPDHP72-201ENST00000402643 1010 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 MRPL42P2-201ENST00000403169 426 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 Y_RNA.615-201ENST00000410769 117 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 OR6E1P-201ENST00000414424 923 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC114760.1-201ENST00000420310 652 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 RAC1P6-201ENST00000423911 575 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC104332.1-201ENST00000440471 797 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 MRPS31P2-201ENST00000451581 518 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 RN7SL213P-201ENST00000463482 317 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 RN7SL259P-201ENST00000478499 253 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 RPL34P33-201ENST00000486062 334 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC106872.3-201ENST00000495104 446 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 TMEM248P1-201ENST00000510579 951 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 SNRPCP8-201ENST00000514820 211 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 IGLV3-29-201ENST00000520084 244 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC022882.1-201ENST00000532142 501 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 RAB30-209ENST00000532548 644 ntTSL 3 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC022880.2-201ENST00000532664 270 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 LINC00520-202ENST00000554196 514 ntTSL 3 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 OR4T1P-201ENST00000554933 911 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC073869.3-201ENST00000609270 580 ntTSL 5 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC068234.2-201ENST00000619646 522 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC108724.2-201ENST00000634593 290 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 MFSD8-259ENST00000642042 2303 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 AP3B2-209ENST00000542200 3921 ntTSL 2 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 SAMMSON-210ENST00000641260 1308 ntBASIC8.44□□□□□ -1.06
LHX6Q9UPM6 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 LINC00284-202ENST00000439707 2521 ntTSL 5 BASIC8.44□□□□□ -1.06
LHX6Q9UPM6 SCML2-201ENST00000251900 4200 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms