Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM4Q9C037 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM4Q9C037 AC006484.1-201ENST00000435086 1884 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM4Q9C037 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
TRIM4Q9C037 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM4Q9C037 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM4Q9C037 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC097063.1-201ENST00000426714 1797 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM4Q9C037 RN7SKP17-201ENST00000411242 351 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 AL663061.1-201ENST00000416625 580 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM4Q9C037 VTI1BP4-201ENST00000427516 527 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 BX119904.3-201ENST00000428194 957 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 PAICSP2-201ENST00000429118 1150 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM4Q9C037 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM4Q9C037 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC099340.1-201ENST00000475247 599 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 NPM1P28-201ENST00000492269 840 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 RN7SL284P-201ENST00000498823 275 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC083906.1-201ENST00000509298 406 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 MTATP6P1-201ENST00000514057 681 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC013244.1-201ENST00000604279 193 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 AC018692.2-201ENST00000624130 348 ntBASIC6.27□□□□□ -1.41
TRIM4Q9C037 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM4Q9C037 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM4Q9C037 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM4Q9C037 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM4Q9C037 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.26□□□□□ -1.41
TRIM4Q9C037 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 AL359976.1-201ENST00000418655 3528 ntBASIC6.26□□□□□ -1.41
TRIM4Q9C037 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 AC004386.1-201ENST00000393214 761 ntBASIC6.26□□□□□ -1.41
TRIM4Q9C037 RN7SKP278-201ENST00000410504 342 ntBASIC6.26□□□□□ -1.41
TRIM4Q9C037 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 GAPDHP57-201ENST00000424400 585 ntBASIC6.26□□□□□ -1.41
TRIM4Q9C037 AC084754.1-201ENST00000463466 464 ntBASIC6.26□□□□□ -1.41
TRIM4Q9C037 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 AC007068.2-201ENST00000543168 395 ntBASIC6.26□□□□□ -1.41
TRIM4Q9C037 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TRIM4Q9C037 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM4Q9C037 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 CIR1P2-201ENST00000514821 1342 ntBASIC6.25□□□□□ -1.41
TRIM4Q9C037 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM4Q9C037 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM4Q9C037 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 274.8 ms