Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 AP000619.2-201ENST00000546014 969 ntBASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 AC009120.3-201ENST00000563335 499 ntBASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 AC233702.7-202ENST00000582941 211 ntBASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 AC111152.1-202ENST00000635848 339 ntBASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CHMP4AQ9BY43 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.11
CHMP4AQ9BY43 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.15□□□□□ -1.11
CHMP4AQ9BY43 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
CHMP4AQ9BY43 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
CHMP4AQ9BY43 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.15□□□□□ -1.11
CHMP4AQ9BY43 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CHMP4AQ9BY43 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 UGT2B27P-201ENST00000505092 1620 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 CYP2G2P-201ENST00000594920 1485 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 STAG3L4-201ENST00000352103 530 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 RN7SKP171-201ENST00000364417 303 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 RN7SKP144-201ENST00000411108 279 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 MTND2P12-201ENST00000417560 1252 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC112492.2-201ENST00000432774 1030 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 RPL5P7-201ENST00000444235 813 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 OR13K1P-201ENST00000444577 975 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AP002453.1-201ENST00000492327 668 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC095052.1-201ENST00000509955 863 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 SNX18P25-201ENST00000510539 758 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC084033.1-201ENST00000550830 633 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC073389.3-201ENST00000609434 935 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 AC243960.7-201ENST00000623532 707 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 LPAL2-203ENST00000454031 2498 ntBASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CHMP4AQ9BY43 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 RNA5SP279-201ENST00000365513 117 ntBASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 MT-RNR1-201ENST00000389680 954 ntBASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 MTND4LP13-201ENST00000425022 298 ntBASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AC092865.3-201ENST00000425390 1026 ntBASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AC108479.1-201ENST00000431142 427 ntBASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 CXCR2P1-202ENST00000443392 1074 ntBASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AC106822.1-201ENST00000502647 526 ntBASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AC112484.3-201ENST00000505910 329 ntBASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AC018797.1-201ENST00000510791 255 ntBASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AP000919.1-201ENST00000582850 985 ntBASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC8.13□□□□□ -1.11
CHMP4AQ9BY43 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms