Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX3Q99909 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SSX3Q99909 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX3Q99909 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 Z97989.1-201ENST00000531702 2421 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX3Q99909 MRRFP1-201ENST00000435941 1675 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX3Q99909 OR13C3-201ENST00000374781 1108 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SSX3Q99909 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.38□□□□□ -1.55
SSX3Q99909 RANP6-201ENST00000413691 644 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX3Q99909 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX3Q99909 SETP10-201ENST00000424368 814 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 AL645939.3-201ENST00000435408 225 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX3Q99909 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 GAPDHP37-201ENST00000442317 968 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 UBBP5-201ENST00000446970 266 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 RPS7P10-201ENST00000464254 603 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 AC005165.2-201ENST00000466070 380 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 RN7SL413P-201ENST00000482700 297 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 AC117500.1-201ENST00000497352 755 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX3Q99909 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX3Q99909 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX3Q99909 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX3Q99909 MIR3157-201ENST00000578688 85 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX3Q99909 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.38□□□□□ -1.55
SSX3Q99909 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX3Q99909 GAPDHP41-201ENST00000613707 975 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 AC025262.3-201ENST00000623666 360 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 AL162377.2-201ENST00000624532 337 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SSX3Q99909 MAPK10-338ENST00000641647 3362 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 CASC19-260ENST00000641828 2001 ntBASIC5.38□□□□□ -1.55
SSX3Q99909 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX3Q99909 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX3Q99909 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SSX3Q99909 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.37□□□□□ -1.55
SSX3Q99909 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
SSX3Q99909 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SSX3Q99909 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
SSX3Q99909 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
SSX3Q99909 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX3Q99909 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX3Q99909 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX3Q99909 OR7A2P-201ENST00000304105 930 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX3Q99909 RNU1-146P-201ENST00000364015 165 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 RN7SKP237-201ENST00000364663 301 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 RNU1-59P-201ENST00000364829 162 ntBASIC5.37□□□□□ -1.55
SSX3Q99909 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms