Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RN7SL51P-201ENST00000468230 285 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.51□□□□□ -1.85
HSPG2P98160 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC3.51□□□□□ -1.85
HSPG2P98160 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC3.51□□□□□ -1.85
HSPG2P98160 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC3.51□□□□□ -1.85
HSPG2P98160 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 BNIP3P22-201ENST00000593399 556 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AL139099.4-201ENST00000614802 114 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AC027348.2-201ENST00000624375 642 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AC022726.2-201ENST00000634673 547 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
HSPG2P98160 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 ERG-204ENST00000398907 4809 ntTSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC3.51□□□□□ -1.85
HSPG2P98160 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HSPG2P98160 MIR134-201ENST00000385258 73 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.51□□□□□ -1.85
HSPG2P98160 RPL10P10-201ENST00000403509 664 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AC004975.1-201ENST00000428733 208 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AC092647.2-201ENST00000452998 253 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 FRG2FP-204ENST00000453982 852 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 AL035690.1-201ENST00000490892 383 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.51□□□□□ -1.85
HSPG2P98160 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.51□□□□□ -1.85
HSPG2P98160 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.5□□□□□ -1.85
HSPG2P98160 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC3.5□□□□□ -1.85
HSPG2P98160 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC3.5□□□□□ -1.85
HSPG2P98160 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
HSPG2P98160 IRF5P1-201ENST00000504852 2164 ntBASIC3.5□□□□□ -1.85
HSPG2P98160 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 LRRC37A4P-202ENST00000581296 5372 ntBASIC3.5□□□□□ -1.85
HSPG2P98160 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.5□□□□□ -1.85
HSPG2P98160 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.5□□□□□ -1.85
HSPG2P98160 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.5□□□□□ -1.85
HSPG2P98160 AC239367.2-201ENST00000447309 705 ntBASIC3.5□□□□□ -1.85
HSPG2P98160 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.5□□□□□ -1.85
HSPG2P98160 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.5□□□□□ -1.85
HSPG2P98160 AC004980.4-201ENST00000513375 203 ntBASIC3.5□□□□□ -1.85
HSPG2P98160 RNA5SP373-201ENST00000517271 95 ntBASIC3.5□□□□□ -1.85
HSPG2P98160 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC3.5□□□□□ -1.85
HSPG2P98160 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.5□□□□□ -1.85
HSPG2P98160 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC3.5□□□□□ -1.85
HSPG2P98160 BGLT3-201ENST00000564523 994 ntBASIC3.5□□□□□ -1.85
HSPG2P98160 AC233699.1-201ENST00000569955 1168 ntBASIC3.5□□□□□ -1.85
HSPG2P98160 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.5□□□□□ -1.85
HSPG2P98160 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
HSPG2P98160 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HSPG2P98160 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HSPG2P98160 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC3.5□□□□□ -1.85
HSPG2P98160 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
HSPG2P98160 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC3.5□□□□□ -1.85
HSPG2P98160 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HSPG2P98160 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HSPG2P98160 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HSPG2P98160 PPP2R2DP1-201ENST00000420526 637 ntBASIC3.5□□□□□ -1.85
HSPG2P98160 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.5□□□□□ -1.85
HSPG2P98160 AC092375.1-201ENST00000550410 637 ntBASIC3.5□□□□□ -1.85
HSPG2P98160 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC3.5□□□□□ -1.85
HSPG2P98160 AC093799.2-201ENST00000610062 578 ntBASIC3.5□□□□□ -1.85
HSPG2P98160 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HSPG2P98160 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC3.5□□□□□ -1.85
HSPG2P98160 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
HSPG2P98160 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 LGALS8-219ENST00000526589 6420 ntAPPRIS P4 TSL 5 BASIC3.5□□□□□ -1.85
HSPG2P98160 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HSPG2P98160 CASC15-203ENST00000605917 4461 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms