Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
VCPP55072 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.69□□□□□ -1.34
VCPP55072 AC022206.1-201ENST00000495947 347 ntBASIC6.69□□□□□ -1.34
VCPP55072 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.69□□□□□ -1.34
VCPP55072 ATP5LP3-201ENST00000514223 304 ntBASIC6.69□□□□□ -1.34
VCPP55072 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.69□□□□□ -1.34
VCPP55072 RNA5SP206-201ENST00000516703 121 ntBASIC6.69□□□□□ -1.34
VCPP55072 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.69□□□□□ -1.34
VCPP55072 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 AC036111.2-201ENST00000533247 901 ntBASIC6.69□□□□□ -1.34
VCPP55072 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.69□□□□□ -1.34
VCPP55072 AC008055.1-201ENST00000547032 609 ntBASIC6.69□□□□□ -1.34
VCPP55072 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 AC135626.1-201ENST00000556983 435 ntBASIC6.69□□□□□ -1.34
VCPP55072 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.69□□□□□ -1.34
VCPP55072 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.69□□□□□ -1.34
VCPP55072 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.69□□□□□ -1.34
VCPP55072 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.69□□□□□ -1.34
VCPP55072 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.69□□□□□ -1.34
VCPP55072 AC073046.2-201ENST00000604756 527 ntBASIC6.69□□□□□ -1.34
VCPP55072 AC024589.2-201ENST00000605642 1294 ntBASIC6.69□□□□□ -1.34
VCPP55072 AC073389.3-201ENST00000609434 935 ntBASIC6.69□□□□□ -1.34
VCPP55072 AL445649.1-201ENST00000615941 691 ntBASIC6.69□□□□□ -1.34
VCPP55072 AC004801.6-201ENST00000616571 978 ntBASIC6.69□□□□□ -1.34
VCPP55072 MIR6085-201ENST00000618314 110 ntBASIC6.69□□□□□ -1.34
VCPP55072 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
VCPP55072 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.69□□□□□ -1.34
VCPP55072 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
VCPP55072 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.69□□□□□ -1.34
VCPP55072 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VCPP55072 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VCPP55072 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VCPP55072 AC090220.1-201ENST00000593078 1699 ntBASIC6.68□□□□□ -1.34
VCPP55072 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
VCPP55072 AL359976.1-201ENST00000418655 3528 ntBASIC6.68□□□□□ -1.34
VCPP55072 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
VCPP55072 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.68□□□□□ -1.34
VCPP55072 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VCPP55072 AL096800.1-201ENST00000405326 893 ntBASIC6.68□□□□□ -1.34
VCPP55072 AL391361.1-201ENST00000405580 489 ntBASIC6.68□□□□□ -1.34
VCPP55072 U3.43-201ENST00000410734 213 ntBASIC6.68□□□□□ -1.34
VCPP55072 RN7SKP161-201ENST00000411110 305 ntBASIC6.68□□□□□ -1.34
VCPP55072 Y_RNA.625-201ENST00000411256 107 ntBASIC6.68□□□□□ -1.34
VCPP55072 AC116036.1-201ENST00000412199 367 ntBASIC6.68□□□□□ -1.34
VCPP55072 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.68□□□□□ -1.34
VCPP55072 AL513325.1-201ENST00000417716 1034 ntBASIC6.68□□□□□ -1.34
VCPP55072 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VCPP55072 AL645936.1-201ENST00000441979 518 ntBASIC6.68□□□□□ -1.34
VCPP55072 HMGN1P36-201ENST00000446623 298 ntBASIC6.68□□□□□ -1.34
VCPP55072 AC098847.1-201ENST00000473094 348 ntBASIC6.68□□□□□ -1.34
VCPP55072 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.68□□□□□ -1.34
VCPP55072 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.68□□□□□ -1.34
VCPP55072 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.68□□□□□ -1.34
VCPP55072 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.68□□□□□ -1.34
VCPP55072 RN7SKP238-201ENST00000516483 249 ntBASIC6.68□□□□□ -1.34
VCPP55072 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.68□□□□□ -1.34
VCPP55072 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.68□□□□□ -1.34
VCPP55072 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.68□□□□□ -1.34
VCPP55072 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.68□□□□□ -1.34
VCPP55072 AC024255.1-201ENST00000614376 102 ntBASIC6.68□□□□□ -1.34
VCPP55072 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.68□□□□□ -1.34
VCPP55072 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VCPP55072 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.68□□□□□ -1.34
VCPP55072 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.68□□□□□ -1.34
VCPP55072 SAGE3P-201ENST00000619800 1635 ntBASIC6.68□□□□□ -1.34
VCPP55072 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.68□□□□□ -1.34
VCPP55072 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
VCPP55072 RBPJP7-201ENST00000442803 1447 ntBASIC6.67□□□□□ -1.34
VCPP55072 RBPJP5-201ENST00000449433 1447 ntBASIC6.67□□□□□ -1.34
VCPP55072 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
VCPP55072 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.67□□□□□ -1.34
VCPP55072 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.67□□□□□ -1.34
VCPP55072 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.67□□□□□ -1.34
VCPP55072 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.67□□□□□ -1.34
VCPP55072 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
VCPP55072 RNA5SP477-201ENST00000362639 119 ntBASIC6.67□□□□□ -1.34
VCPP55072 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
VCPP55072 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
VCPP55072 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 UBFD1P1-201ENST00000473259 814 ntBASIC6.67□□□□□ -1.34
VCPP55072 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.67□□□□□ -1.34
VCPP55072 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 AL158068.1-201ENST00000506116 616 ntBASIC6.67□□□□□ -1.34
VCPP55072 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.67□□□□□ -1.34
VCPP55072 AC131392.1-201ENST00000506490 633 ntBASIC6.67□□□□□ -1.34
VCPP55072 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 NATP-201ENST00000523491 878 ntBASIC6.67□□□□□ -1.34
VCPP55072 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.67□□□□□ -1.34
VCPP55072 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 AC020916.2-201ENST00000591242 360 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms