Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC8.37□□□□□ -1.07
ATF3P18847 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
ATF3P18847 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.37□□□□□ -1.07
ATF3P18847 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
ATF3P18847 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ATF3P18847 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.36□□□□□ -1.07
ATF3P18847 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ATF3P18847 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.36□□□□□ -1.07
ATF3P18847 PARP4P2-201ENST00000446672 3326 ntBASIC8.36□□□□□ -1.07
ATF3P18847 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ATF3P18847 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.36□□□□□ -1.07
ATF3P18847 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ATF3P18847 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
ATF3P18847 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
ATF3P18847 OR11H13P-201ENST00000359695 979 ntBASIC8.36□□□□□ -1.07
ATF3P18847 RNA5SP350-201ENST00000363298 111 ntBASIC8.36□□□□□ -1.07
ATF3P18847 RN7SKP125-201ENST00000410481 302 ntBASIC8.36□□□□□ -1.07
ATF3P18847 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC8.36□□□□□ -1.07
ATF3P18847 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ATF3P18847 RPL12P3-201ENST00000440080 396 ntBASIC8.36□□□□□ -1.07
ATF3P18847 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.36□□□□□ -1.07
ATF3P18847 EEF1B2P5-201ENST00000444820 548 ntBASIC8.36□□□□□ -1.07
ATF3P18847 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC8.36□□□□□ -1.07
ATF3P18847 AC095057.1-201ENST00000507583 168 ntBASIC8.36□□□□□ -1.07
ATF3P18847 HIGD1AP14-201ENST00000507617 282 ntBASIC8.36□□□□□ -1.07
ATF3P18847 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.36□□□□□ -1.07
ATF3P18847 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.36□□□□□ -1.07
ATF3P18847 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC8.36□□□□□ -1.07
ATF3P18847 AL359704.2-201ENST00000604335 521 ntBASIC8.36□□□□□ -1.07
ATF3P18847 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC8.36□□□□□ -1.07
ATF3P18847 AC007683.2-201ENST00000624681 714 ntBASIC8.36□□□□□ -1.07
ATF3P18847 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ATF3P18847 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.36□□□□□ -1.07
ATF3P18847 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ATF3P18847 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ATF3P18847 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
ATF3P18847 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ATF3P18847 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
ATF3P18847 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ATF3P18847 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ATF3P18847 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
ATF3P18847 AC092725.2-201ENST00000567658 1389 ntBASIC8.35□□□□□ -1.07
ATF3P18847 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.35□□□□□ -1.07
ATF3P18847 OR4G1P-202ENST00000641173 1788 ntBASIC8.35□□□□□ -1.07
ATF3P18847 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
ATF3P18847 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
ATF3P18847 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
ATF3P18847 AL662795.2-201ENST00000624252 3706 ntBASIC8.35□□□□□ -1.07
ATF3P18847 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 FLJ42393-201ENST00000623801 2270 ntBASIC8.35□□□□□ -1.07
ATF3P18847 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 RNA5SP375-201ENST00000362975 119 ntBASIC8.35□□□□□ -1.07
ATF3P18847 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.35□□□□□ -1.07
ATF3P18847 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC8.35□□□□□ -1.07
ATF3P18847 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.35□□□□□ -1.07
ATF3P18847 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC8.35□□□□□ -1.07
ATF3P18847 HMGB3P24-201ENST00000433260 622 ntBASIC8.35□□□□□ -1.07
ATF3P18847 ELOCP3-201ENST00000439303 348 ntBASIC8.35□□□□□ -1.07
ATF3P18847 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC8.35□□□□□ -1.07
ATF3P18847 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
ATF3P18847 AC004453.1-201ENST00000487895 408 ntBASIC8.35□□□□□ -1.07
ATF3P18847 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.35□□□□□ -1.07
ATF3P18847 RNU6-615P-201ENST00000516065 106 ntBASIC8.35□□□□□ -1.07
ATF3P18847 RNU6-551P-201ENST00000516661 103 ntBASIC8.35□□□□□ -1.07
ATF3P18847 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC8.35□□□□□ -1.07
ATF3P18847 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC8.35□□□□□ -1.07
ATF3P18847 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC8.35□□□□□ -1.07
ATF3P18847 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.35□□□□□ -1.07
ATF3P18847 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC8.35□□□□□ -1.07
ATF3P18847 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC8.35□□□□□ -1.07
ATF3P18847 Mico1.1-201ENST00000611698 204 ntBASIC8.35□□□□□ -1.07
ATF3P18847 AL359513.1-201ENST00000614364 557 ntBASIC8.35□□□□□ -1.07
ATF3P18847 ATM-229ENST00000639953 587 ntTSL 5 BASIC8.35□□□□□ -1.07
ATF3P18847 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 AC025809.2-201ENST00000625085 1802 ntBASIC8.35□□□□□ -1.07
ATF3P18847 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
ATF3P18847 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
ATF3P18847 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
ATF3P18847 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
ATF3P18847 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
ATF3P18847 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.34□□□□□ -1.07
ATF3P18847 AC005332.9-201ENST00000620266 2921 ntBASIC8.34□□□□□ -1.07
ATF3P18847 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ATF3P18847 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
ATF3P18847 RNA5SP507-201ENST00000363603 121 ntBASIC8.34□□□□□ -1.07
ATF3P18847 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.34□□□□□ -1.07
ATF3P18847 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC8.34□□□□□ -1.07
ATF3P18847 RPL23AP27-201ENST00000415161 451 ntBASIC8.34□□□□□ -1.07
ATF3P18847 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.34□□□□□ -1.07
ATF3P18847 AL139148.1-201ENST00000427122 680 ntBASIC8.34□□□□□ -1.07
ATF3P18847 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms