Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
APOBP04114 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
APOBP04114 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 GTF2IP2-201ENST00000424290 697 ntBASIC3.54□□□□□ -1.84
APOBP04114 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC3.54□□□□□ -1.84
APOBP04114 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.54□□□□□ -1.84
APOBP04114 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.54□□□□□ -1.84
APOBP04114 RPL23AP60-201ENST00000450011 454 ntBASIC3.54□□□□□ -1.84
APOBP04114 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.54□□□□□ -1.84
APOBP04114 AC021074.2-201ENST00000468434 172 ntBASIC3.54□□□□□ -1.84
APOBP04114 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.54□□□□□ -1.84
APOBP04114 NRBF2P4-201ENST00000520874 850 ntBASIC3.54□□□□□ -1.84
APOBP04114 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
APOBP04114 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC3.54□□□□□ -1.84
APOBP04114 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC3.54□□□□□ -1.84
APOBP04114 AC011840.5-201ENST00000582125 771 ntBASIC3.54□□□□□ -1.84
APOBP04114 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
APOBP04114 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
APOBP04114 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
APOBP04114 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC3.54□□□□□ -1.84
APOBP04114 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
APOBP04114 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 RPS27AP7-201ENST00000422792 455 ntBASIC3.54□□□□□ -1.84
APOBP04114 RPS27AP6-201ENST00000427962 448 ntBASIC3.54□□□□□ -1.84
APOBP04114 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.54□□□□□ -1.84
APOBP04114 RN7SL41P-201ENST00000476144 297 ntBASIC3.54□□□□□ -1.84
APOBP04114 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.54□□□□□ -1.84
APOBP04114 RPL7P16-201ENST00000479738 738 ntBASIC3.54□□□□□ -1.84
APOBP04114 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.54□□□□□ -1.84
APOBP04114 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 AP005432.2-201ENST00000608162 586 ntBASIC3.54□□□□□ -1.84
APOBP04114 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC3.54□□□□□ -1.84
APOBP04114 TCL6_3.1-201ENST00000619064 137 ntBASIC3.54□□□□□ -1.84
APOBP04114 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC3.54□□□□□ -1.84
APOBP04114 AC105046.1-201ENST00000566457 4997 ntBASIC3.54□□□□□ -1.84
APOBP04114 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 FRY-202ENST00000380250 10688 ntTSL 5 BASIC3.54□□□□□ -1.84
APOBP04114 FRY-209ENST00000642040 10697 ntBASIC3.54□□□□□ -1.84
APOBP04114 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC3.54□□□□□ -1.84
APOBP04114 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC3.54□□□□□ -1.84
APOBP04114 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC3.54□□□□□ -1.84
APOBP04114 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 ERG-204ENST00000398907 4809 ntTSL 5 BASIC3.54□□□□□ -1.84
APOBP04114 RPL23P2-201ENST00000320371 421 ntBASIC3.54□□□□□ -1.84
APOBP04114 RNU4-4P-201ENST00000364588 130 ntBASIC3.54□□□□□ -1.84
APOBP04114 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.54□□□□□ -1.84
APOBP04114 AC093824.1-201ENST00000508796 343 ntBASIC3.54□□□□□ -1.84
APOBP04114 AL132640.3-201ENST00000630473 177 ntBASIC3.54□□□□□ -1.84
APOBP04114 SAMMSON-209ENST00000641222 1100 ntBASIC3.54□□□□□ -1.84
APOBP04114 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC3.54□□□□□ -1.84
APOBP04114 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC3.54□□□□□ -1.84
APOBP04114 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC3.54□□□□□ -1.84
APOBP04114 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
APOBP04114 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC3.54□□□□□ -1.84
APOBP04114 TNPO1P2-201ENST00000426249 2665 ntBASIC3.54□□□□□ -1.84
APOBP04114 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC3.54□□□□□ -1.84
APOBP04114 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
APOBP04114 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 AL354868.1-201ENST00000417077 482 ntBASIC3.54□□□□□ -1.84
APOBP04114 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 FRG2FP-204ENST00000453982 852 ntBASIC3.54□□□□□ -1.84
APOBP04114 RPS18P6-201ENST00000476880 458 ntBASIC3.54□□□□□ -1.84
APOBP04114 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC3.54□□□□□ -1.84
APOBP04114 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.54□□□□□ -1.84
APOBP04114 AC013701.1-201ENST00000522657 465 ntBASIC3.54□□□□□ -1.84
APOBP04114 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.54□□□□□ -1.84
APOBP04114 AL731556.1-201ENST00000394628 3711 ntBASIC3.54□□□□□ -1.84
APOBP04114 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC3.54□□□□□ -1.84
APOBP04114 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APOBP04114 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
APOBP04114 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC3.53□□□□□ -1.84
APOBP04114 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms