Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HCFC2P1-201ENST00000392864 1592 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.25□□□□□ -1.41
PDGFBP01127 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.25□□□□□ -1.41
PDGFBP01127 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PDGFBP01127 LINC01616-201ENST00000561816 2280 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFBP01127 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 MAPK10-261ENST00000641050 3109 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.25□□□□□ -1.41
PDGFBP01127 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.24□□□□□ -1.41
PDGFBP01127 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PDGFBP01127 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 RNA5SP46-201ENST00000362370 120 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 RNA5SP394-201ENST00000364216 119 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.24□□□□□ -1.41
PDGFBP01127 RNU1-46P-201ENST00000384425 164 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 AL050305.1-201ENST00000399993 1230 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.24□□□□□ -1.41
PDGFBP01127 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.24□□□□□ -1.41
PDGFBP01127 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.24□□□□□ -1.41
PDGFBP01127 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFBP01127 AL662874.1-201ENST00000426065 230 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 AC092017.2-201ENST00000427600 362 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.24□□□□□ -1.41
PDGFBP01127 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFBP01127 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.24□□□□□ -1.41
PDGFBP01127 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.24□□□□□ -1.41
PDGFBP01127 RPL12P3-201ENST00000440080 396 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 SPRYD7P1-201ENST00000443861 570 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 OR13C1P-201ENST00000457612 963 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 FTH1P2-201ENST00000466086 412 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 AC090142.2-201ENST00000483263 416 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 RN7SL808P-201ENST00000496066 299 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 CDH12P4-201ENST00000517835 295 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 CDH12P3-201ENST00000517935 295 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 CDH12P1-201ENST00000518435 295 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFBP01127 PTTG3P-201ENST00000521862 606 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 AC006530.1-201ENST00000555980 571 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 AL356801.1-201ENST00000559320 294 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
PDGFBP01127 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
PDGFBP01127 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFBP01127 AL645933.2-201ENST00000606743 1207 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 AC025171.4-201ENST00000607250 1047 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 AL445222.1-201ENST00000607259 628 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 AL008723.3-201ENST00000608926 449 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 AC007204.2-201ENST00000615022 616 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFBP01127 AC034229.6-201ENST00000623704 224 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
PDGFBP01127 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 AC015871.3-201ENST00000618835 2261 ntBASIC6.24□□□□□ -1.41
PDGFBP01127 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
PDGFBP01127 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFBP01127 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PDGFBP01127 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFBP01127 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFBP01127 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PDGFBP01127 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFBP01127 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.23□□□□□ -1.41
PDGFBP01127 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFBP01127 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 RNA5SP500-201ENST00000364486 119 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 SNORA56-201ENST00000383966 129 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PDGFBP01127 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 RPL37P18-201ENST00000411602 243 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 RPL35AP3-201ENST00000414680 288 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFBP01127 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.23□□□□□ -1.41
PDGFBP01127 RPL21P133-201ENST00000443666 476 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 GEMIN2P1-201ENST00000454246 752 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 RNU7-157P-201ENST00000459600 66 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 AC005532.2-201ENST00000467154 373 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 RN7SL329P-201ENST00000467740 299 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms