Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 AC136624.1-201ENST00000400791 413 ntBASIC8.13□□□□□ -1.11
XRN1Q8IZH2 NENFP1-201ENST00000419476 466 ntBASIC8.13□□□□□ -1.11
XRN1Q8IZH2 RPS21P4-201ENST00000487122 248 ntBASIC8.13□□□□□ -1.11
XRN1Q8IZH2 KCTD9P4-201ENST00000526766 1166 ntBASIC8.13□□□□□ -1.11
XRN1Q8IZH2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 RBM22P12-201ENST00000567098 1255 ntBASIC8.13□□□□□ -1.11
XRN1Q8IZH2 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 MIR6837-201ENST00000620884 64 ntBASIC8.13□□□□□ -1.11
XRN1Q8IZH2 AL390318.1-201ENST00000624564 687 ntBASIC8.13□□□□□ -1.11
XRN1Q8IZH2 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 PARP4P1-201ENST00000435945 2337 ntBASIC8.13□□□□□ -1.11
XRN1Q8IZH2 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.13□□□□□ -1.11
XRN1Q8IZH2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AL031595.3-201ENST00000624919 14262 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AC023421.1-201ENST00000590535 1785 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 MIR550A3-201ENST00000390735 95 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 PSMD10P3-201ENST00000437000 448 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AC110775.1-201ENST00000513721 462 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AC126177.5-201ENST00000549599 178 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 SNORA56-201ENST00000383966 129 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AL589647.1-201ENST00000402485 466 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AL121835.1-201ENST00000404250 354 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 RPA2P2-201ENST00000419698 796 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AC108075.1-201ENST00000424692 529 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 SCARNA6.1-201ENST00000516989 238 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AP000676.2-201ENST00000529711 301 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AC004825.1-201ENST00000555068 586 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AC015720.2-201ENST00000567709 334 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AL049539.1-201ENST00000611964 459 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 AP001784.1-201ENST00000624107 428 ntBASIC8.12□□□□□ -1.11
XRN1Q8IZH2 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 MRRFP1-201ENST00000435941 1675 ntBASIC8.11□□□□□ -1.11
XRN1Q8IZH2 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 MYL6P5-201ENST00000412707 459 ntBASIC8.11□□□□□ -1.11
XRN1Q8IZH2 AL451136.1-201ENST00000435399 325 ntBASIC8.11□□□□□ -1.11
XRN1Q8IZH2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 AC012616.1-201ENST00000600294 197 ntBASIC8.11□□□□□ -1.11
XRN1Q8IZH2 AC126915.2-201ENST00000610957 190 ntBASIC8.11□□□□□ -1.11
XRN1Q8IZH2 AL355974.3-201ENST00000617383 467 ntBASIC8.11□□□□□ -1.11
XRN1Q8IZH2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
XRN1Q8IZH2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
XRN1Q8IZH2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
XRN1Q8IZH2 SELE-203ENST00000367775 3389 ntTSL 5 BASIC8.1□□□□□ -1.11
XRN1Q8IZH2 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
XRN1Q8IZH2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms