Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AC015801.1-201ENST00000585651 153 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AL020997.3-201ENST00000602843 359 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 NDUFB9P1-201ENST00000604683 510 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AC016877.3-201ENST00000606778 504 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 Y_RNA.804-201ENST00000615262 101 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AL162574.1-201ENST00000615702 950 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AL356321.1-201ENST00000621360 228 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AC099654.12-201ENST00000639868 649 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AC102941.1-201ENST00000567616 1537 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 AC073429.2-201ENST00000569694 1444 ntBASIC9.05□□□□□ -0.96
RC3H1Q5TC82 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC9.05□□□□□ -0.96
RC3H1Q5TC82 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 XIST-206ENST00000434839 2865 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 Y_RNA.62-201ENST00000362840 99 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 RNU6-181P-201ENST00000363225 107 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 RN7SKP77-201ENST00000363261 353 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 SNORA26.8-201ENST00000391306 124 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 RN7SKP188-201ENST00000410789 317 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 MTATP6P27-201ENST00000416987 621 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 GEMIN2P2-201ENST00000418195 715 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AL109913.1-201ENST00000421173 514 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AL022100.1-202ENST00000421214 548 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC112653.1-201ENST00000443851 386 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 RPL6P5-201ENST00000445678 828 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 SUN3-208ENST00000453192 801 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AP002345.1-201ENST00000456493 928 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 RPL30P6-201ENST00000475925 342 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC108941.1-201ENST00000502853 530 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 PCNAP1-201ENST00000505363 709 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC139272.1-201ENST00000505516 640 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 RPL37P25-201ENST00000507308 276 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 GUSBP9-201ENST00000510138 584 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 Vault.2-201ENST00000516519 98 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 RN7SKP5-201ENST00000517045 272 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC021483.2-201ENST00000567415 758 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC040162.2-201ENST00000573092 157 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 MIR3671-201ENST00000580455 88 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 RPS11-205ENST00000599561 430 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC023513.1-201ENST00000604396 691 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 CLPTM1LP1-201ENST00000604519 484 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 HMGB1P51-201ENST00000605166 638 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC015849.2-201ENST00000605738 409 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms