Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL390318.1-201ENST00000624564 687 ntBASIC7□□□□□ -1.29
COL4A5P29400 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
COL4A5P29400 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7□□□□□ -1.29
COL4A5P29400 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 LINC01963-201ENST00000562038 3148 ntBASIC7□□□□□ -1.29
COL4A5P29400 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
COL4A5P29400 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7□□□□□ -1.29
COL4A5P29400 RPL23P2-201ENST00000320371 421 ntBASIC7□□□□□ -1.29
COL4A5P29400 RMRPP5-201ENST00000411156 267 ntBASIC7□□□□□ -1.29
COL4A5P29400 AC006335.2-201ENST00000437993 330 ntBASIC7□□□□□ -1.29
COL4A5P29400 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7□□□□□ -1.29
COL4A5P29400 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7□□□□□ -1.29
COL4A5P29400 HIGD1AP5-201ENST00000529959 259 ntBASIC7□□□□□ -1.29
COL4A5P29400 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7□□□□□ -1.29
COL4A5P29400 AP001784.1-201ENST00000624107 428 ntBASIC7□□□□□ -1.29
COL4A5P29400 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7□□□□□ -1.29
COL4A5P29400 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A5P29400 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
COL4A5P29400 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A5P29400 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.99□□□□□ -1.29
COL4A5P29400 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.99□□□□□ -1.29
COL4A5P29400 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A5P29400 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A5P29400 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A5P29400 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A5P29400 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A5P29400 AL139805.2-201ENST00000455305 2433 ntBASIC6.99□□□□□ -1.29
COL4A5P29400 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A5P29400 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.99□□□□□ -1.29
COL4A5P29400 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A5P29400 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A5P29400 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A5P29400 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
COL4A5P29400 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A5P29400 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.99□□□□□ -1.29
COL4A5P29400 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A5P29400 HMGA1P8-201ENST00000414130 321 ntBASIC6.99□□□□□ -1.29
COL4A5P29400 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A5P29400 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A5P29400 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A5P29400 RPL15P21-201ENST00000495592 567 ntBASIC6.99□□□□□ -1.29
COL4A5P29400 AC090638.1-201ENST00000498296 909 ntBASIC6.99□□□□□ -1.29
COL4A5P29400 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A5P29400 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL4A5P29400 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.99□□□□□ -1.29
COL4A5P29400 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.99□□□□□ -1.29
COL4A5P29400 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.99□□□□□ -1.29
COL4A5P29400 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC6.99□□□□□ -1.29
COL4A5P29400 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.99□□□□□ -1.29
COL4A5P29400 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.99□□□□□ -1.29
COL4A5P29400 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.99□□□□□ -1.29
COL4A5P29400 AC013731.1-201ENST00000604340 883 ntBASIC6.99□□□□□ -1.29
COL4A5P29400 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COL4A5P29400 MFSD8-219ENST00000641228 2559 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.98□□□□□ -1.29
COL4A5P29400 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
COL4A5P29400 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
COL4A5P29400 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC6.98□□□□□ -1.29
COL4A5P29400 AL355377.1-201ENST00000621125 1653 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.98□□□□□ -1.29
COL4A5P29400 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL4A5P29400 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL4A5P29400 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 AL390774.1-201ENST00000411924 246 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 RPS26P13-201ENST00000419030 330 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 AC087672.1-201ENST00000479876 766 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.98□□□□□ -1.29
COL4A5P29400 RNA5SP228-201ENST00000516232 133 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 AC021678.3-201ENST00000517893 476 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.98□□□□□ -1.29
COL4A5P29400 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.98□□□□□ -1.29
COL4A5P29400 MRPS21P7-201ENST00000566937 238 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
COL4A5P29400 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.98□□□□□ -1.29
COL4A5P29400 TAS2R6P-201ENST00000605022 826 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
COL4A5P29400 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL4A5P29400 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
COL4A5P29400 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
COL4A5P29400 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL4A5P29400 AC110716.2-201ENST00000563865 3945 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 SALL4P7-201ENST00000555779 3120 ntBASIC6.98□□□□□ -1.29
COL4A5P29400 IMMTP1-201ENST00000435590 2219 ntBASIC6.97□□□□□ -1.29
COL4A5P29400 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL4A5P29400 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL4A5P29400 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.97□□□□□ -1.29
COL4A5P29400 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL4A5P29400 Z82209.2-201ENST00000623410 2012 ntBASIC6.97□□□□□ -1.29
COL4A5P29400 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL4A5P29400 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms