Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PTPRMP28827 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPRMP28827 RPS16P5-201ENST00000406501 404 ntBASIC8.68□□□□□ -1.02
PTPRMP28827 AL133325.1-201ENST00000421090 382 ntBASIC8.68□□□□□ -1.02
PTPRMP28827 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC8.68□□□□□ -1.02
PTPRMP28827 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPRMP28827 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC8.68□□□□□ -1.02
PTPRMP28827 NDUFA5P9-201ENST00000472609 340 ntBASIC8.68□□□□□ -1.02
PTPRMP28827 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC8.68□□□□□ -1.02
PTPRMP28827 RPA2P3-201ENST00000533268 770 ntBASIC8.68□□□□□ -1.02
PTPRMP28827 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC8.68□□□□□ -1.02
PTPRMP28827 AC006116.3-201ENST00000592968 361 ntBASIC8.68□□□□□ -1.02
PTPRMP28827 AL023583.1-201ENST00000607518 1143 ntBASIC8.68□□□□□ -1.02
PTPRMP28827 AC009163.6-201ENST00000612367 342 ntBASIC8.68□□□□□ -1.02
PTPRMP28827 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPRMP28827 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTPRMP28827 AC110597.1-201ENST00000562669 3176 ntBASIC8.68□□□□□ -1.02
PTPRMP28827 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PTPRMP28827 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PTPRMP28827 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.68□□□□□ -1.02
PTPRMP28827 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPRMP28827 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PTPRMP28827 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPRMP28827 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
PTPRMP28827 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPRMP28827 AC104581.5-201ENST00000624171 7141 ntBASIC8.67□□□□□ -1.02
PTPRMP28827 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPRMP28827 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPRMP28827 RNA5SP131-201ENST00000365452 119 ntBASIC8.67□□□□□ -1.02
PTPRMP28827 RNU1-77P-201ENST00000390868 162 ntBASIC8.67□□□□□ -1.02
PTPRMP28827 AL133173.1-201ENST00000423458 397 ntBASIC8.67□□□□□ -1.02
PTPRMP28827 AL139415.1-201ENST00000424862 352 ntBASIC8.67□□□□□ -1.02
PTPRMP28827 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC8.67□□□□□ -1.02
PTPRMP28827 AL663074.2-201ENST00000440621 479 ntBASIC8.67□□□□□ -1.02
PTPRMP28827 RPS7P3-201ENST00000443360 580 ntBASIC8.67□□□□□ -1.02
PTPRMP28827 AC011753.3-201ENST00000443436 406 ntBASIC8.67□□□□□ -1.02
PTPRMP28827 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC8.67□□□□□ -1.02
PTPRMP28827 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC8.67□□□□□ -1.02
PTPRMP28827 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPRMP28827 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC8.67□□□□□ -1.02
PTPRMP28827 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.67□□□□□ -1.02
PTPRMP28827 AC018558.5-201ENST00000565840 952 ntBASIC8.67□□□□□ -1.02
PTPRMP28827 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPRMP28827 AC083809.1-201ENST00000615051 472 ntBASIC8.67□□□□□ -1.02
PTPRMP28827 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.67□□□□□ -1.02
PTPRMP28827 AC087516.1-201ENST00000561236 2428 ntBASIC8.67□□□□□ -1.02
PTPRMP28827 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.67□□□□□ -1.02
PTPRMP28827 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PTPRMP28827 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC8.66□□□□□ -1.02
PTPRMP28827 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
PTPRMP28827 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.66□□□□□ -1.02
PTPRMP28827 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.66□□□□□ -1.02
PTPRMP28827 EPS15P1-202ENST00000459691 2071 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC8.66□□□□□ -1.02
PTPRMP28827 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC8.66□□□□□ -1.02
PTPRMP28827 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC8.66□□□□□ -1.02
PTPRMP28827 AC109462.1-201ENST00000491087 368 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 AC090638.1-201ENST00000498296 909 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 OR56A7P-201ENST00000524865 941 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 OR4A42P-201ENST00000531397 938 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 ATP5J2P6-201ENST00000565203 266 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 AC087283.1-201ENST00000604029 1074 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 LINC01739-205ENST00000641890 573 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
PTPRMP28827 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.66□□□□□ -1.02
PTPRMP28827 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.66□□□□□ -1.02
PTPRMP28827 KYNUP3-201ENST00000574386 1341 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 MFSD8-216ENST00000641147 4009 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 BIN2P1-201ENST00000504996 1530 ntBASIC8.66□□□□□ -1.02
PTPRMP28827 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
PTPRMP28827 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.66□□□□□ -1.02
PTPRMP28827 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPRMP28827 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC8.65□□□□□ -1.02
PTPRMP28827 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
PTPRMP28827 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.65□□□□□ -1.02
PTPRMP28827 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
PTPRMP28827 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC8.65□□□□□ -1.02
PTPRMP28827 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
PTPRMP28827 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PTPRMP28827 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC8.65□□□□□ -1.02
PTPRMP28827 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC8.65□□□□□ -1.02
PTPRMP28827 AC016712.1-201ENST00000431088 378 ntBASIC8.65□□□□□ -1.02
PTPRMP28827 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC8.65□□□□□ -1.02
PTPRMP28827 RPS18P6-201ENST00000476880 458 ntBASIC8.65□□□□□ -1.02
PTPRMP28827 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PTPRMP28827 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PTPRMP28827 BRD9P1-201ENST00000529855 560 ntBASIC8.65□□□□□ -1.02
PTPRMP28827 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms