Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 Y_RNA.126-201ENST00000363382 111 ntBASIC3.56□□□□□ -1.84
APOBP04114 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
APOBP04114 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 USP9YP9-201ENST00000429406 715 ntBASIC3.56□□□□□ -1.84
APOBP04114 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 OR6D1P-201ENST00000436165 939 ntBASIC3.56□□□□□ -1.84
APOBP04114 AC112187.1-201ENST00000455837 479 ntBASIC3.56□□□□□ -1.84
APOBP04114 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC3.56□□□□□ -1.84
APOBP04114 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.56□□□□□ -1.84
APOBP04114 AL445528.2-201ENST00000620582 470 ntBASIC3.56□□□□□ -1.84
APOBP04114 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC3.56□□□□□ -1.84
APOBP04114 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
APOBP04114 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
APOBP04114 AP000866.6-201ENST00000638898 3579 ntBASIC3.55□□□□□ -1.84
APOBP04114 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 FAM3C2-201ENST00000312214 681 ntBASIC3.55□□□□□ -1.84
APOBP04114 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC3.55□□□□□ -1.84
APOBP04114 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBP04114 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBP04114 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBP04114 AC093162.1-201ENST00000419682 124 ntBASIC3.55□□□□□ -1.84
APOBP04114 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 RNA5SP400-201ENST00000517155 111 ntBASIC3.55□□□□□ -1.84
APOBP04114 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 AP002373.2-201ENST00000541631 1060 ntBASIC3.55□□□□□ -1.84
APOBP04114 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 AC244502.2-201ENST00000543361 851 ntBASIC3.55□□□□□ -1.84
APOBP04114 ATP5J2P6-201ENST00000565203 266 ntBASIC3.55□□□□□ -1.84
APOBP04114 MIR4480-201ENST00000582492 71 ntBASIC3.55□□□□□ -1.84
APOBP04114 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBP04114 AC234771.5-201ENST00000600161 514 ntBASIC3.55□□□□□ -1.84
APOBP04114 AL021368.3-201ENST00000607119 578 ntBASIC3.55□□□□□ -1.84
APOBP04114 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
APOBP04114 AC012254.5-201ENST00000623573 478 ntBASIC3.55□□□□□ -1.84
APOBP04114 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
APOBP04114 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC3.55□□□□□ -1.84
APOBP04114 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
APOBP04114 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 AL353625.1-202ENST00000366273 571 ntBASIC3.55□□□□□ -1.84
APOBP04114 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 DSTNP5-201ENST00000427921 523 ntBASIC3.55□□□□□ -1.84
APOBP04114 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 RN7SL817P-201ENST00000480777 288 ntBASIC3.55□□□□□ -1.84
APOBP04114 OR11I1P-201ENST00000486033 954 ntBASIC3.55□□□□□ -1.84
APOBP04114 DUTP1-201ENST00000493631 470 ntBASIC3.55□□□□□ -1.84
APOBP04114 AC073581.1-201ENST00000519036 575 ntBASIC3.55□□□□□ -1.84
APOBP04114 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC3.55□□□□□ -1.84
APOBP04114 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.55□□□□□ -1.84
APOBP04114 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
APOBP04114 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 AL353796.1-201ENST00000561542 3241 ntBASIC3.55□□□□□ -1.84
APOBP04114 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 AC011493.1-201ENST00000596753 1632 ntBASIC3.55□□□□□ -1.84
APOBP04114 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 RNA5SP305-201ENST00000362665 119 ntBASIC3.55□□□□□ -1.84
APOBP04114 RNA5SP123-201ENST00000363244 119 ntBASIC3.55□□□□□ -1.84
APOBP04114 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC3.55□□□□□ -1.84
APOBP04114 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.55□□□□□ -1.84
APOBP04114 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC3.55□□□□□ -1.84
APOBP04114 PDCL3P4-201ENST00000489621 720 ntBASIC3.55□□□□□ -1.84
APOBP04114 RNA5SP373-201ENST00000517271 95 ntBASIC3.55□□□□□ -1.84
APOBP04114 AL049872.1-201ENST00000556323 322 ntBASIC3.55□□□□□ -1.84
APOBP04114 AC015720.2-201ENST00000567709 334 ntBASIC3.55□□□□□ -1.84
APOBP04114 AC008745.1-201ENST00000604064 271 ntBASIC3.55□□□□□ -1.84
APOBP04114 AL627230.1-201ENST00000613077 211 ntBASIC3.55□□□□□ -1.84
APOBP04114 AL591926.8-201ENST00000616876 211 ntBASIC3.55□□□□□ -1.84
APOBP04114 AC009704.2-201ENST00000618739 483 ntBASIC3.55□□□□□ -1.84
APOBP04114 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 AC073869.10-201ENST00000642016 354 ntBASIC3.55□□□□□ -1.84
APOBP04114 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC3.55□□□□□ -1.84
APOBP04114 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 PCDHA4-204ENST00000618834 10557 ntBASIC3.55□□□□□ -1.84
APOBP04114 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC3.55□□□□□ -1.84
APOBP04114 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOBP04114 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms