Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC005962.2-201ENST00000611427 652 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC7.3□□□□□ -1.24
PDGFAP04085 AC104964.2-201ENST00000562242 4641 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PDGFAP04085 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.29□□□□□ -1.24
PDGFAP04085 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.29□□□□□ -1.24
PDGFAP04085 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.29□□□□□ -1.24
PDGFAP04085 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 AC109315.1-201ENST00000584143 1347 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.29□□□□□ -1.24
PDGFAP04085 OR4C1P-202ENST00000641065 1569 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 AL137918.1-201ENST00000624542 1922 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
PDGFAP04085 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 AL157713.1-201ENST00000379752 1531 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 CASC19-243ENST00000641588 1546 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AC016716.1-201ENST00000265882 708 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 RNA5SP448-201ENST00000363151 111 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 RNU6-1339P-201ENST00000363574 91 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 FHL1-203ENST00000370676 833 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 HMGB3P1-201ENST00000393368 573 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 OR6C69P-201ENST00000394268 893 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 KRT18P52-201ENST00000404956 846 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC7.29□□□□□ -1.24
PDGFAP04085 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 PTP4A1P1-201ENST00000420539 515 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.29□□□□□ -1.24
PDGFAP04085 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC7.29□□□□□ -1.24
PDGFAP04085 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.29□□□□□ -1.24
PDGFAP04085 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 FTH1P16-201ENST00000435241 552 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.29□□□□□ -1.24
PDGFAP04085 AL121601.2-201ENST00000438019 707 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 AC093155.1-201ENST00000440164 826 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AL136454.1-201ENST00000443181 466 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.29□□□□□ -1.24
PDGFAP04085 FGF7P6-202ENST00000451282 293 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 DNAJC19P1-201ENST00000455312 319 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.29□□□□□ -1.24
PDGFAP04085 AC022730.2-201ENST00000465359 452 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.29□□□□□ -1.24
PDGFAP04085 AL122013.1-201ENST00000473054 801 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC7.29□□□□□ -1.24
PDGFAP04085 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 RN7SL549P-201ENST00000478997 282 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 OR9A3P-202ENST00000485185 878 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 RN7SL569P-201ENST00000494652 288 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.29□□□□□ -1.24
PDGFAP04085 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.29□□□□□ -1.24
PDGFAP04085 OR7E83P-201ENST00000511021 970 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.29□□□□□ -1.24
PDGFAP04085 RN7SKP242-201ENST00000515967 289 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 OR4C2P-201ENST00000530855 1064 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDGFAP04085 ATP5J2P4-201ENST00000538774 267 ntBASIC7.29□□□□□ -1.24
PDGFAP04085 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.29□□□□□ -1.24
PDGFAP04085 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC7.29□□□□□ -1.24
PDGFAP04085 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.29□□□□□ -1.24
PDGFAP04085 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.29□□□□□ -1.24
PDGFAP04085 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC7.29□□□□□ -1.24
PDGFAP04085 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.29□□□□□ -1.24
PDGFAP04085 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms