Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.2□□□□□ -1.26
COL1A1P02452 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL1A1P02452 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL1A1P02452 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL1A1P02452 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL1A1P02452 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL1A1P02452 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.19□□□□□ -1.26
COL1A1P02452 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.19□□□□□ -1.26
COL1A1P02452 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.19□□□□□ -1.26
COL1A1P02452 RN7SKP128-201ENST00000364270 303 ntBASIC7.19□□□□□ -1.26
COL1A1P02452 TMA16P2-201ENST00000413187 601 ntBASIC7.19□□□□□ -1.26
COL1A1P02452 NME1P1-201ENST00000420914 382 ntBASIC7.19□□□□□ -1.26
COL1A1P02452 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.19□□□□□ -1.26
COL1A1P02452 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.19□□□□□ -1.26
COL1A1P02452 AC008410.1-201ENST00000483777 339 ntBASIC7.19□□□□□ -1.26
COL1A1P02452 RPL38P3-201ENST00000484463 213 ntBASIC7.19□□□□□ -1.26
COL1A1P02452 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.19□□□□□ -1.26
COL1A1P02452 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.19□□□□□ -1.26
COL1A1P02452 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
COL1A1P02452 AC007494.1-201ENST00000562293 760 ntBASIC7.19□□□□□ -1.26
COL1A1P02452 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL1A1P02452 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL1A1P02452 MIR193BHG-214ENST00000641765 509 ntBASIC7.19□□□□□ -1.26
COL1A1P02452 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.19□□□□□ -1.26
COL1A1P02452 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL1A1P02452 PDZK1P1-202ENST00000425209 1350 ntBASIC7.19□□□□□ -1.26
COL1A1P02452 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.19□□□□□ -1.26
COL1A1P02452 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
COL1A1P02452 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL1A1P02452 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL1A1P02452 Z83820.1-201ENST00000456978 1499 ntBASIC7.19□□□□□ -1.26
COL1A1P02452 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL1A1P02452 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL1A1P02452 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
COL1A1P02452 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
COL1A1P02452 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.19□□□□□ -1.26
COL1A1P02452 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.19□□□□□ -1.26
COL1A1P02452 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.19□□□□□ -1.26
COL1A1P02452 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.19□□□□□ -1.26
COL1A1P02452 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.18□□□□□ -1.26
COL1A1P02452 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.18□□□□□ -1.26
COL1A1P02452 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL1A1P02452 SNORA64.1-201ENST00000362600 132 ntBASIC7.18□□□□□ -1.26
COL1A1P02452 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL1A1P02452 OR2W4P-201ENST00000406496 926 ntBASIC7.18□□□□□ -1.26
COL1A1P02452 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.18□□□□□ -1.26
COL1A1P02452 MRPL53P1-201ENST00000414323 319 ntBASIC7.18□□□□□ -1.26
COL1A1P02452 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.18□□□□□ -1.26
COL1A1P02452 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.18□□□□□ -1.26
COL1A1P02452 RPS4XP5-201ENST00000419038 768 ntBASIC7.18□□□□□ -1.26
COL1A1P02452 AC007568.1-201ENST00000422912 471 ntBASIC7.18□□□□□ -1.26
COL1A1P02452 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.18□□□□□ -1.26
COL1A1P02452 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
COL1A1P02452 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.18□□□□□ -1.26
COL1A1P02452 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
COL1A1P02452 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.18□□□□□ -1.26
COL1A1P02452 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.18□□□□□ -1.26
COL1A1P02452 AL049840.6-201ENST00000604583 345 ntBASIC7.18□□□□□ -1.26
COL1A1P02452 AL691477.1-201ENST00000624398 162 ntBASIC7.18□□□□□ -1.26
COL1A1P02452 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
COL1A1P02452 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.18□□□□□ -1.26
COL1A1P02452 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
COL1A1P02452 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL1A1P02452 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
COL1A1P02452 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL1A1P02452 OFD1P17-201ENST00000437639 3018 ntBASIC7.18□□□□□ -1.26
COL1A1P02452 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.18□□□□□ -1.26
COL1A1P02452 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.18□□□□□ -1.26
COL1A1P02452 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL1A1P02452 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
COL1A1P02452 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL1A1P02452 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.18□□□□□ -1.26
COL1A1P02452 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL1A1P02452 USP9YP3-201ENST00000434481 1766 ntBASIC7.18□□□□□ -1.26
COL1A1P02452 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL1A1P02452 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.18□□□□□ -1.26
COL1A1P02452 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
COL1A1P02452 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 HMGB1P20-201ENST00000402555 677 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 RN7SKP29-201ENST00000410957 272 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 OR2AT2P-201ENST00000413438 905 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.17□□□□□ -1.26
COL1A1P02452 AC099677.3-201ENST00000427081 395 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.17□□□□□ -1.26
COL1A1P02452 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.17□□□□□ -1.26
COL1A1P02452 RN7SL57P-201ENST00000493687 290 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 AC138866.2-201ENST00000508650 584 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.17□□□□□ -1.26
COL1A1P02452 RNA5SP34-201ENST00000516887 130 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.17□□□□□ -1.26
COL1A1P02452 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.17□□□□□ -1.26
COL1A1P02452 MIR132-201ENST00000591554 101 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 BNIP3P32-201ENST00000600015 554 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 AC004836.1-201ENST00000623032 634 ntBASIC7.17□□□□□ -1.26
COL1A1P02452 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL1A1P02452 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.17□□□□□ -1.26
COL1A1P02452 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.17□□□□□ -1.26
COL1A1P02452 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms