Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 U3.1-201ENST00000362500 215 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 RN7SKP1-201ENST00000365525 307 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 Y_RNA.509-201ENST00000384506 99 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 OFD1P18Y-201ENST00000420889 959 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 VN1R20P-201ENST00000425215 966 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AL365184.2-201ENST00000431139 435 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 PHBP4-201ENST00000437447 837 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 PSMB7P1-201ENST00000556349 514 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 RN7SL42P-201ENST00000579786 294 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC011453.2-201ENST00000603737 729 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AL109936.2-201ENST00000605350 650 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC245028.3-201ENST00000618197 285 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AL158209.2-201ENST00000619266 216 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AP000577.1-201ENST00000624366 878 ntBASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHB11Q9Y5F2 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 RNU4-31P-201ENST00000384211 141 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 RPS3AP23-201ENST00000401762 784 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AL109918.1-202ENST00000406724 436 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 RPL17P12-201ENST00000413391 526 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 OR10U1P-201ENST00000414690 905 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AC073614.1-201ENST00000438690 650 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AL450263.2-201ENST00000439400 589 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 SNORD42A-201ENST00000459584 64 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 NDUFA5P12-201ENST00000503796 343 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AC008638.2-201ENST00000503840 715 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AC106872.4-201ENST00000510050 523 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AC091839.1-201ENST00000513087 269 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 CYP4F27P-201ENST00000514557 494 ntBASIC7.8□□□□□ -1.16
PCDHB11Q9Y5F2 RNU6-1308P-201ENST00000516817 103 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms