Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MIR6071-201ENST00000616741 78 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AL078595.2-201ENST00000605309 1780 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AC007938.1-201ENST00000562524 2902 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 ZNF849P-201ENST00000594711 1566 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AL161891.1-201ENST00000621575 4636 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 HMGB1P10-201ENST00000395823 563 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 RN7SKP166-201ENST00000410812 305 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AL513325.1-201ENST00000417716 1034 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 MGAT2P2-201ENST00000427194 797 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC093166.3-201ENST00000448785 303 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 CYCSP42-201ENST00000450823 238 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 RPL12P7-201ENST00000493832 494 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 DEFB130C-202ENST00000530001 230 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC090616.1-201ENST00000583895 447 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AL592221.1-201ENST00000605266 382 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC025253.1-201ENST00000613623 543 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AL590396.3-201ENST00000636334 300 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 CASC19-232ENST00000641480 1244 ntBASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ZC3H4Q9UPT8 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms