Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZNF887P-201ENST00000431363 1407 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 SIMC1-201ENST00000332772 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AKR1D1-201ENST00000242375 2347 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 PREPL-202ENST00000378511 2315 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 MCC-209ENST00000515367 3844 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 BRD7P1-201ENST00000557705 1915 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 TCF4-240ENST00000568673 2398 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 SLAMF7-203ENST00000368043 2689 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC092683.1-204ENST00000610408 2830 ntTSL 2 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC159540.2-202ENST00000613749 2830 ntTSL 2 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AP000776.1-201ENST00000530032 1663 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 HNRNPA1L2-201ENST00000357495 3011 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 RNU4-79P-201ENST00000362764 141 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 RNY4P14-201ENST00000363656 96 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 Y_RNA.372-201ENST00000365599 102 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 RNU5A-6P-201ENST00000384136 116 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 SNORA40.2-201ENST00000390847 128 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 FCF1P10-201ENST00000407590 479 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AL022400.1-201ENST00000423946 935 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 MTCO2P12-201ENST00000427426 682 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 VN1R38P-201ENST00000450265 887 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 HSPD1P18-201ENST00000504252 244 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC090071.1-201ENST00000507713 644 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC113347.3-201ENST00000509113 148 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 RNA5SP459-201ENST00000516628 100 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC013701.1-201ENST00000522657 465 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 PRR13P4-201ENST00000577786 421 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AL512605.2-201ENST00000592972 256 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 RPL7AP69-201ENST00000595306 806 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC063977.5-201ENST00000601044 974 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 SAMMSON-227ENST00000642114 1199 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 SMARCD1-205ENST00000548573 2095 ntTSL 5 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 RP1-206ENST00000636932 3649 ntTSL 5 BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC134508.1-201ENST00000570082 2977 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AC023632.6-201ENST00000624338 2177 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 CCT4P2-201ENST00000233836 1548 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 MTCO1P23-201ENST00000415223 1526 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 AP002765.1-201ENST00000528675 1507 ntBASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
COL25A1Q9BXS0 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms