Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 RNU5B-4P-201ENST00000363508 111 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 BMS1P3-201ENST00000372011 932 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AL121949.2-201ENST00000403446 1548 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 ARL2BPP3-201ENST00000421226 480 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 TXNP2-201ENST00000443918 295 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 MTND2P4-201ENST00000445034 1004 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 NMNAT1P3-201ENST00000457517 888 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AC099340.1-201ENST00000475247 599 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 RN7SL379P-201ENST00000479912 293 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AC134050.1-201ENST00000495088 933 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 SNX18P25-201ENST00000510539 758 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AC074087.1-201ENST00000512059 724 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 IGLVIV-64-201ENST00000518581 301 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AC021733.2-201ENST00000518830 497 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AL391156.1-201ENST00000554965 554 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 MTND4P33-201ENST00000556706 766 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 MT1CP-201ENST00000567054 174 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 MIR3135A-201ENST00000578460 77 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AC080078.2-201ENST00000603766 501 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AL035461.2-201ENST00000619201 524 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AL121895.2-201ENST00000619558 447 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AC129502.1-201ENST00000623261 1654 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 MIR4302-201ENST00000638058 60 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 CASC19-255ENST00000641733 1385 ntBASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNGAP1Q96PV0 AL353763.1-201ENST00000624467 1628 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 PPIAP26-201ENST00000377951 522 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 HMGB3P19-201ENST00000403971 560 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 USP9YP26-201ENST00000421008 661 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 OR5M12P-201ENST00000423388 929 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC007383.1-201ENST00000445875 636 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AKR1D1P1-201ENST00000457236 936 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 CCNJP2-201ENST00000457810 1163 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 GUSBP9-201ENST00000510138 584 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms